Diffusion tamaas (petsc) History

tamaas/src/core
petscb2f9e4544b613cd6f4c838a…

Mar 17 2021

separating TAMAAS_BACKEND to reflect the build parameters
b2f9e4544b61
·frerot on Mar 17 2021, 22:23.

Jan 7 2021

stopped using leading and trailing __ in header guards
2b523bbf68a7
·frerot on Jan 7 2021, 02:54.
Merge branch 'deprecated_bindings'
10e17acc88ce
·frerot on Jan 7 2021, 01:58.
removed all legacy code
8b01fcdb4d21
·frerot on Jan 7 2021, 01:32.

Jan 4 2021

const correctness of fftengine
af6a620b3dce
·frerot on Jan 4 2021, 22:47.

Jan 1 2021

copyright year 2021
2316c9ebcdd7
·frerot on Jan 1 2021, 07:47.

Dec 14 2020

renamed USE_CUDA macro to TAMAAS_USE_CUDA
44fd0470bd21
·frerot on Dec 14 2020, 18:05.

Dec 10 2020

only warning once about mpi
460a2d811c4e
·frerot on Dec 10 2020, 03:46.
properly setting size of underlying array in grid views
cbef215a579d
·frerot on Dec 10 2020, 03:24.

Dec 9 2020

added newline for debug messages
c6cda5e747be
·frerot on Dec 9 2020, 22:57.
fixed a bug in the computation of grid strides
10c9ddd1e0e0
·frerot on Dec 9 2020, 22:56.

Dec 8 2020

correcting fundamental mode only on root rank
02240a9f1952
·frerot on Dec 8 2020, 22:20.
uniform debug messages with TAMAAS_DEBUG_MSG macro
83b12befa682
·frerot on Dec 8 2020, 17:16.

Dec 1 2020

making an fftengine on the fly in stats functions
24b0fa8bbc51
·frerot on Dec 1 2020, 21:14.

Nov 25 2020

Merge branch 'feature/mpi_fft_engine'
fdea6b4ef4a4
·frerot on Nov 25 2020, 21:35.
added experimental mpi warning
f5786e6cbeff
·frerot on Nov 25 2020, 21:29.

Oct 23 2020

added a function to compute deviatoric of sym tensor fields
54aab33e784a
·frerot on Oct 23 2020, 21:58.

Sep 1 2020

rename USE_MPI to TAMAAS_USE_MPI
a18819dd25e3
·frerot on Sep 1 2020, 23:26.
Merge branch 'master' into feature/mpi_fft_engine
ddb30ba41df9
·frerot on Sep 1 2020, 23:22.

Aug 31 2020

silenced warnings about deprecated copy ctors
5e6c40b035b2
·frerot on Aug 31 2020, 19:00.

Aug 13 2020

added helper method to compute (corrected) contact areas
c9eb34ff4665
·frerot on Aug 13 2020, 17:15.

Aug 8 2020

prefer this email
3838c1d4ac9d
·frerot on Aug 8 2020, 01:04.

Aug 6 2020

updating emails and refreshing pipe_tools
bb36f61af70a
·frerot on Aug 6 2020, 23:54.
reducing float test tolerance to 4ε
9d631430e38f
·frerot on Aug 6 2020, 01:22.

Aug 3 2020

Merge branch 'feature/dfsane'
0aff1cd1a985
·frerot on Aug 3 2020, 21:28.

Aug 2 2020

allowing compilation without OpenMP
d6d8134e1bba
·frerot on Aug 2 2020, 02:07.

Aug 1 2020

tentative implementation of DFSANESolver
cf36e15d08a3
·frerot on Aug 1 2020, 01:42.

Jul 17 2020

using global datasize/nbpoints functions when needed
e51c229537c2
·frerot on Jul 17 2020, 21:04.

Jul 15 2020

proper singleton for mpi::comm::world ensures working seq_guard
a9660ef02eed
·frerot on Jul 15 2020, 21:56.

Jul 12 2020

added some debug logs
b8ad8692d3ee
·frerot on Jul 12 2020, 01:30.

Jul 11 2020

computeFrequencies now takes local sizes as argument
2696ba6deb02
·frerot on Jul 11 2020, 23:01.
implemented + tested mpi version of FFTEngine::computeFrequencies
0672d04558bb
·frerot on Jul 11 2020, 17:34.

Jul 10 2020

Merge branch 'master' into feature/mpi_fft_engine
0defcff64961
·frerot on Jul 10 2020, 23:59.
redirecting iostreams to python streams for solve functions
6124726e1b08
·frerot on Jul 10 2020, 23:27.
added polymorphism to FFTEngines
0752a2fdb670
·frerot on Jul 10 2020, 00:06.

Jul 9 2020

split fftw mpi interface
ebfd54d08a16
·frerot on Jul 9 2020, 16:58.

Jul 6 2020

tentative implementation of surface generation with mpi
5b293e6eba23
·frerot on Jul 6 2020, 04:17.

Jul 4 2020

added mpi reductions to loops
3f746e302ec4
·frerot on Jul 4 2020, 15:44.

Jul 2 2020

logging info on root proc
dfa9798ca373
·frerot on Jul 2 2020, 17:34.
added FFTMPIEngine
8facf8e0cda6
·frerot on Jul 2 2020, 16:59.

Jul 1 2020

no need for type traits to print enum labels
962ac4122e60
·frerot on Jul 1 2020, 15:14.
added reserve method to array and grid base
ddca5e722d54
·frerot on Jul 1 2020, 05:23.
allowing subclasses of FFTEngine
cb641f5bb816
·frerot on Jul 1 2020, 05:20.
safeguarding initialization functions
ddd01b4279a8
·frerot on Jul 1 2020, 05:20.

Jun 28 2020

proper initializing of mpi and fftw with threads
1a1af8988bd3
·frerot on Jun 28 2020, 17:32.
making fftengine internals more accessible for subclassing
37620cc9f8b9
·frerot on Jun 28 2020, 15:09.
ensuring initialize and finalized get called
04fa2ac30483
·frerot on Jun 28 2020, 03:09.

Jun 25 2020

getting rid of BOOST_PP_STRINGIZE
f1073dba0c14
·frerot on Jun 25 2020, 17:43.
removed FFTPlanManager and consorts
a66ead09e464
·frerot on Jun 25 2020, 03:06.
simplified alloc of in/out pointers in FFTEngine
aa1de33be858
·frerot on Jun 25 2020, 02:38.
making FFTEngine work with fftw flags >= FFTW_MEASURE
5b7d5e177fcd
·frerot on Jun 25 2020, 02:24.
removed remaining calls to FFTPlanManager
8f3b1410b161
·frerot on Jun 25 2020, 00:54.

Jun 24 2020

cleaning up the use of preprocessor macros
3cc1d8a160a7
·frerot on Jun 24 2020, 05:07.
removed unecessary LONG_PRECISION macro guard for fftw interface
548c812ae786
·frerot on Jun 24 2020, 04:28.
moved implementation of legacy surface statistics to separate cpp
75a2de973a73
·frerot on Jun 24 2020, 04:16.
using holder type for fftw plans in FFTEngine
d66116666bb9
·frerot on Jun 24 2020, 01:18.
fixing long double fftw interface
b4bacea3061c
·frerot on Jun 24 2020, 01:16.
converted statistics to FFTEngine
6bd8cd25056a
·frerot on Jun 24 2020, 00:18.

Jun 23 2020

adding computeFrequencies to FFTEngine
be7bc1258547
·frerot on Jun 23 2020, 21:13.

Jun 22 2020

added FFTEngine class
f8e1e9c7a919
·frerot on Jun 22 2020, 20:54.

Jun 2 2020

simplify git diff stored in binary
64ad818b2ad5
·frerot on Jun 2 2020, 20:39.

May 5 2020

updating copyright years
ae0010d56921
·frerot on May 5 2020, 18:13.

Oct 4 2019

added -pedantic to compile flags (except pybind11)
903a03968664
·frerot on Oct 4 2019, 16:04.
[lint] performance suggestions from clang-tidy
374ff2b778cf
·frerot on Oct 4 2019, 10:07.

Sep 24 2019

[lint] removed dead code in surface stats
c12ade2646ab
·frerot on Sep 24 2019, 18:58.
linting on modernize-* rules in clang-tidy
35997c97068f
·frerot on Sep 24 2019, 18:48.
adding move operations on iterators
1372165db991
·frerot on Sep 24 2019, 18:47.

Aug 13 2019

keeping openmp when tbb enabled because of tamaas::initialize
db0e2e12a4a3
·frerot on Aug 13 2019, 17:58.
added option to compile with TBB thrust backend
cd016f434e5f
·frerot on Aug 13 2019, 17:22.

Jul 29 2019

fixed issues with long double warnings
32da06a0d51a
·frerot on Jul 29 2019, 18:09.

Jul 25 2019

necessary changes to make tests pass in long double
3842898f7a1d
·frerot on Jul 25 2019, 17:28.
typed DEFAULT_ALLOCATOR macro
90e9cdc70ad2
·frerot on Jul 25 2019, 14:10.

Jul 24 2019

added support for long integers and long doubles
17e2e4873937
·frerot on Jul 24 2019, 19:58.
adapted code to allow a change in integer type
10037a017efb
·frerot on Jul 24 2019, 14:39.

Jul 10 2019

moved eigenvalues computation to separate submodule + vonMises
05f6175eafb9
·frerot on Jul 10 2019, 12:21.

May 1 2019

removed __(BEGIN|END)_TAMAAS__ macros and replaced with namespace
cb09ff877dab
·frerot on May 1 2019, 12:58.

Apr 5 2019

added simple logging capabilities
a240eb50bf7e
·frerot on Apr 5 2019, 16:22.

Apr 1 2019

added logo and updated documentation
e32b40407aef
·frerot on Apr 1 2019, 14:49.

Mar 14 2019

fixed eigenvalues + proper test
5c99be7b00c2
·frerot on Mar 14 2019, 10:57.

Mar 13 2019

added eigenvalue computation on fields
73057c1f714c
·frerot on Mar 13 2019, 19:53.
replaced registered fields with shared pointers
3e2bb81840fb
·frerot on Mar 13 2019, 19:52.

Mar 11 2019

added invariants and eigenvalues for order 3 tensors
dea0fa68046b
·frerot on Mar 11 2019, 16:47.
no need to manually synchronize in later thrust versions
788bb35f3844
·frerot on Mar 11 2019, 16:47.

Mar 8 2019

sfinae on operator() for grids
b0470d99e22c
·frerot on Mar 8 2019, 13:45.

Mar 5 2019

changed license to Affero GNU General Public License
74b9233dc365
·frerot on Mar 5 2019, 12:32.

Feb 22 2019

after two years, I have fixed the surface statistics !
03b3153e4183
·frerot on Feb 22 2019, 18:04.

Feb 20 2019

fixing compile error
a8432e633e62
·frerot on Feb 20 2019, 16:32.
added unary - operator to static types
ede9def911e3
·frerot on Feb 20 2019, 15:58.

Feb 8 2019

removed conic utilities
50f3aaaf19e1
·frerot on Feb 8 2019, 11:44.

Feb 7 2019

better error message of range components mismatch
2ced3ac28e8b
·frerot on Feb 7 2019, 13:01.

Feb 6 2019

converted the rest of model/ to voigt notation, tests passing
b4eaf27d3aa3
·frerot on Feb 6 2019, 16:25.
modified some model behavior for voigt notation (WIP)
c23abaf90bd2
·frerot on Feb 6 2019, 13:59.

Feb 5 2019

made modifications to integral operators for voigt notation
14a4e8181b5e
·frerot on Feb 5 2019, 16:06.
added conic algebra operators
b131c655a463
·frerot on Feb 5 2019, 15:11.

Feb 1 2019

added symmetric matrix class in Mendel notation
c22c583bc15f
·frerot on Feb 1 2019, 15:26.

Jan 23 2019

c++14 in static types
5fbd7159a327
·frerot on Jan 23 2019, 21:16.

Jan 11 2019

we're back to being compatible with c++14 and g++ 6
e464edbbeb88
·frerot on Jan 11 2019, 15:43.

Jan 9 2019

added static assert for container type in ranges + headless range
bc7404956c58
·frerot on Jan 9 2019, 14:00.

Jan 8 2019

added test for accumulation
383b32a7e7be
·frerot on Jan 8 2019, 17:40.

Jan 7 2019

partial implementation of new integration in Kevlin
c74466647365
·frerot on Jan 7 2019, 15:28.