Processing & Analysis Scripts for QuPath

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Processing and Analysis Scripts for QuPath

You can make this folder YOUR Default Scripts folder , by setting it into Edit → Preferences → Script Directory

Color Deconvolution

using QuPath

tutorial

using ImageJ Plugin combined with Threshold

Using the ImageJ plugin through ImageJ macro

Analyse by Annotations names

A Groovy script for QuPath

Export annotations within QuPath

Using Groovy script works for 1 image or 1 project.

Using ImageJ macro works for 1 image