Diffusion PySONIC (old) abfba2e921d7

first commit to c4science
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Authored by tlemaire on Aug 23 2017, 14:28.

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first commit to c4science

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tlemaire

Aug 23 2017, 14:28

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tlemaire

Aug 23 2017, 14:29

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tlemaire committed R4670:abfba2e921d7: first commit to c4science (authored by tlemaire).Aug 23 2017, 14:28

Changes (100)

		Path
A		.gitignore
A		LICENSE
A		MANIFEST.in
A	(dir)	PointNICE/
A		PointNICE.sublime-project
A		PointNICE/__init__.py
A		PointNICE/bls.py
A	(dir)	PointNICE/channels/
A		PointNICE/channels/__init__.py
A		PointNICE/channels/base.py
A		PointNICE/channels/cortical.py
A		PointNICE/channels/leech.py
A		PointNICE/channels/thalamic.py
A		PointNICE/constants.py
A		PointNICE/params.yaml
A		PointNICE/pltvars.py
A	(dir)	PointNICE/solvers/
A		PointNICE/solvers/SolverElec.py
A		PointNICE/solvers/SolverUS.py
A		PointNICE/solvers/__init__.py
A		PointNICE/solvers/utils.py
A		PointNICE/utils.py
A		README.md
A	(dir)	deprecated/
A	(dir)	deprecated/GPR/
A		deprecated/GPR/test_GPR1D.py
A		deprecated/GPR/test_GPR2D.py
A		deprecated/GPR/test_GPR2D_multiout.py
A		deprecated/GPR/test_bayesian_optimization.py
A	(dir)	deprecated/Taylor expansions/
A		deprecated/Taylor expansions/plot_rates_derivatives.py
A		deprecated/Taylor expansions/test_alpham_Taylor.py
A		deprecated/Taylor expansions/test_alpham_eff_Taylor.py
A	(dir)	deprecated/curve fitting/
A		deprecated/curve fitting/fit_Vmeff.py
A		deprecated/curve fitting/fit_alphaheff.py
A		deprecated/curve fitting/fit_alphameff.py
A		deprecated/curve fitting/fit_alphaneff.py
A		deprecated/curve fitting/fit_betaheff.py
A		deprecated/curve fitting/fit_betameff.py
A		deprecated/curve fitting/fit_betaneff.py
A		deprecated/curve fitting/fit_eff_coeffs.py
A	(dir)	deprecated/file management/
A		deprecated/file management/create_data_folders.py
A		deprecated/file management/datasort.py
A	(dir)	deprecated/kriging/
A		deprecated/kriging/lhs.py
A		deprecated/kriging/test_pykrige_Vmeff.py
A		deprecated/kriging/test_pykriging1D.py
A		deprecated/kriging/test_pykriging2D.py
A	(dir)	deprecated/miscellaneous/
A		deprecated/miscellaneous/plot_ZeqQS0.py
A		deprecated/miscellaneous/postpro_rmse_charge.py
A		deprecated/miscellaneous/test_downsampling.py
A		deprecated/miscellaneous/test_intermolecular_fit.py
A		deprecated/miscellaneous/test_interp_speed.py
A		deprecated/update_lookups.py
A	(dir)	docs/
A		docs/PointNICE.SolverElec.rst
A		docs/PointNICE.SolverUS.rst
A		docs/PointNICE.base.rst
A		docs/PointNICE.bls.rst
A		docs/PointNICE.channels.rst
A		docs/PointNICE.cortical.rst
A		docs/PointNICE.leech.rst
A		docs/PointNICE.solvers.rst
A		docs/PointNICE.thalamic.rst
A		docs/PointNICE.utils.rst
A		docs/index.rst
A	(dir)	plot/
A		plot/plot_ESTIM_anim.py
A		plot/plot_Ih_kinetics.py
A		plot/plot_P_vs_I.py
A		plot/plot_RS_rate_constants.py
A		plot/plot_batch.py
A		plot/plot_comp.py
A		plot/plot_eff_coeffs.py
A		plot/plot_forces.py
A		plot/plot_gating_kinetics.py
A	(dir)	postpro/
A		postpro/postpro_latency.py
A		postpro/postpro_rmse_charge.py
A		postpro/postpro_sensitivity_diameter.py
A		postpro/postpro_sensitivity_embedding.py
A		postpro/postpro_sensitivity_stim_embedded.py
A		postpro/postpro_sensitivity_stim_exposed.py
A		postpro/postpro_spikerate.py
A		postpro/postpro_spikes.py
A		postpro/postpro_threshold_duration.py
A		postpro/postpro_threshold_frequency.py
A		setup.py
A	(dir)	sim/
A		sim/ASTIM_lookups.py
A		sim/ASTIM_mech_batch.py
A		sim/ASTIM_sim_batch.py
A		sim/ASTIM_titration_batch.py
A		sim/ESTIM_sim_batch.py
A	(dir)	tests/
A		tests/test_basic.py
A		tests/test_graphs.py