Diffusion akantu (bugfixes/python_interface_energy_computations) History

rAKA/src/mesh
bugfixes/python_interfa…33327d9f46e4a69465dc938…

Mar 10 2021

Getting rid of the static memory
33327d9f46e4
·richart on Mar 10 2021, 00:01.

Nov 13 2020

Minor improvements to help debugging
92684d20aee0
·richart on Nov 13 2020, 18:26.
bug fix in mesh distribution
e6cb89c743c8
·richart on Nov 13 2020, 18:26.
Bug fix in size computation
7fe6b3c3c105
·richart on Nov 13 2020, 18:25.
bug fix in the insertion of 3d elements
cf7c4837cb90
·richart on Nov 13 2020, 18:25.
Full rewrite of cohesive insertion to ensure the order of insertion across…
36b61f922c3e
·richart on Nov 13 2020, 18:25.
clang-tidy
2494dc4e9df3
·richart on Nov 13 2020, 18:25.
A bit of cleanup of the code
18bc82b3bd6a
·richart on Nov 13 2020, 18:25.
Change in pybind11 compilation
d0b63cea21e3
·richart on Nov 13 2020, 12:03.
Bug fixes and compilation warning cleaning:
1f6666b97403
·richart on Nov 13 2020, 12:03.

May 6 2020

Modifications for the documentation
f2b54f6e0331
·richart on May 6 2020, 20:17.

Mar 15 2020

some changes to make PBC work again in sequential: to review
f2e4a0fa4491
·anciaux on Mar 15 2020, 09:55.

Mar 13 2020

correct a memory fault problem with the pbc
4da59a0e63c4
·anciaux on Mar 13 2020, 08:35.

Dec 11 2019

fixed warning [-Wempty-body] in Mesh::read
b9311d8ff17e
·frerot on Dec 11 2019, 17:35.

Oct 4 2019

Moving the flipFacet call to the mesh facet creation code
dd086a28369f
·richart on Oct 4 2019, 16:50.
adding info to mesh events
ff09fbb08786
·richart on Oct 4 2019, 15:58.

Aug 9 2019

made the getNbDataPerElem more generic
7c4625ecd4a8
·richart on Aug 9 2019, 19:17.

Jul 19 2019

arc lint --everything
fe2c711063a8
·richart on Jul 19 2019, 16:32.

Jun 16 2019

Bug fix in Dumper shared_ptr changes
7d83cd218a34
·richart on Jun 16 2019, 16:15.
Merge branch 'features/pybind11' of c4science:/diffusion/AKAPRIV/akantu-private…
59acc25aa216
·richart on Jun 16 2019, 12:50.

Jun 15 2019

Merge branch 'master' into features/pybind11
0e4984f5a64d
·richart on Jun 15 2019, 18:24.

Jun 14 2019

Remove the raw pointers on dumper::Fields
b8a8a46e2135
·anciaux on Jun 14 2019, 15:27.

Jun 13 2019

Bug fix in the createElementGroups function
5d2dc82607de
·richart on Jun 13 2019, 00:20.

Jun 12 2019

Fixing bugs in parallel:
788ec250fa23
·richart on Jun 12 2019, 18:29.

Jun 5 2019

Repairing some swig things
1308f870eb08
·richart on Jun 5 2019, 19:38.
Merge branch 'master' into features/petsc
69c3f4c90ff0
·richart on Jun 5 2019, 17:47.

Jun 4 2019

Merge branch 'master' of c4science.ch:/diffusion/AKAPRIV/akantu-private
d77e9ccf0452
·richart on Jun 4 2019, 16:05.

Jun 2 2019

Bug fix in the MSH reader version 4
7a04471d3e4d
·richart on Jun 2 2019, 20:49.

May 31 2019

Merge branch 'master' of c4science.ch:/diffusion/AKAPRIV/akantu-private
b1971f0dd3a7
·richart on May 31 2019, 21:19.
Correction of the default element types within element_type_map:
e6acdd6c5042
·gallyamov / richart on May 31 2019, 17:37.

May 29 2019

Update on mesh_io_msh read and write
df7dd4dc2abc
·richart on May 29 2019, 15:22.

May 21 2019

Modified MSH reader for version 4.1 of the files
84880d975de9
·richart on May 21 2019, 19:50.

May 9 2019

removing swig
84d2362e4f31
·anciaux on May 9 2019, 13:15.

May 8 2019

Correction of the default element types within element_type_map:
2aa1e344ee31
·gallyamov / anciaux on May 8 2019, 15:14.

Apr 5 2019

dynamic_cast -> as_type
1e093d42f748
·richart on Apr 5 2019, 15:21.

Mar 27 2019

First correct solution obtained with PETSc
0183db140277
·richart on Mar 27 2019, 15:52.

Mar 20 2019

setting rpath for python extension
ad8da63e2e3d
·frerot on Mar 20 2019, 14:25.

Feb 26 2019

exposing partitionate parameters in distribute
76e9be0a5b66
·richart on Feb 26 2019, 12:49.

Jan 29 2019

Bug fix in column iterator and some cleaning
4ffeb75ecfda
·richart on Jan 29 2019, 23:19.

Dec 30 2018

Scoping more enums
ef8b48beb2fc
·richart on Dec 30 2018, 15:40.

Dec 28 2018

Scoping some enums
08b1837389c4
·richart on Dec 28 2018, 16:03.
adding bool as a mesh_data
7237f444b33e
·richart on Dec 28 2018, 14:54.

Nov 9 2018

Bug fix in parallel cohesive insertion:
7b2e468f963a
·richart on Nov 9 2018, 16:00.

Nov 6 2018

solved some swig issues
7e2cd66c9507
·richart on Nov 6 2018, 17:02.

Nov 2 2018

making firstType lastType deprecated + bug fix in internalfields
052424c24651
·richart on Nov 2 2018, 17:06.

Oct 31 2018

bug fixes in 1d
41a834663730
·richart on Oct 31 2018, 10:32.
modernizing some code
ed8a2ee04528
·richart on Oct 31 2018, 10:31.

Oct 10 2018

Merge branch 'features/pbc'
0dc284119849
·richart on Oct 10 2018, 10:26.

Sep 25 2018

Adding the mesh nodal data to the python interface
7b78eda9f30a
·richart on Sep 25 2018, 17:39.

Sep 12 2018

Adding transform adaptor and nodedata in mesh data
023a4b630b0e
·richart on Sep 12 2018, 13:22.

Sep 5 2018

make periodic debugging
8ec3c922e7ee
·richart on Sep 5 2018, 13:49.

Aug 29 2018

Adding some functions in the python interface
71beddeb9549
·richart on Aug 29 2018, 14:08.

Jul 19 2018

commit to push before vacations: this version is currently broken
327aad04af0a
·richart on Jul 19 2018, 16:57.

Jun 19 2018

Implementing missing function fir makePeriodic
d35974ef9782
·richart on Jun 19 2018, 15:07.

Jun 15 2018

Initialize the is_periodic variable
40c729a672b7
·richart on Jun 15 2018, 12:03.
Pre-working stage for PBC:
d4f0b6028779
·richart on Jun 15 2018, 11:02.

May 30 2018

Multiple changes in order to start implementation of periodicity
033a8225e32a
·richart on May 30 2018, 14:47.

Apr 17 2018

adding debug info in makePeriodic
ba0d478cf0b3
·richart on Apr 17 2018, 17:53.

Apr 9 2018

Syntax error in mesh.cc DEBUG_ERROR -> ERROR
195608c9be30
·richart on Apr 9 2018, 14:53.

Apr 4 2018

NodeType becomes NodeFlags + node_prank
7d530d027fd0
·richart on Apr 4 2018, 17:53.
Adding BBox
e71e540aaa48
·richart on Apr 4 2018, 17:10.
adding a mesh makePeriodic function
ba18e5860efa
·richart on Apr 4 2018, 17:08.
Adding a full blown object to treat bounding boxes
a6ae4099f295
·richart on Apr 4 2018, 17:07.
Adding functionality for periodicity in the mesh
11d8a4d1b2c5
·richart on Apr 4 2018, 17:05.

Mar 15 2018

Fixing bug introduced due to change of behavior when mesh distributed in…
29f36af846c5
·richart on Mar 15 2018, 13:08.

Mar 14 2018

Bug fix for static computations with cohesive elements
c643c426521c
·richart on Mar 14 2018, 02:44.

Mar 13 2018

Cleaning getBarycenter
2897202b1f6d
·richart on Mar 13 2018, 03:29.

Mar 11 2018

Typo in a node type
f0e158294f0f
·richart on Mar 11 2018, 04:08.

Mar 10 2018

Bug fix in the cohesive element insertion
28d5a660b2e7
·richart on Mar 10 2018, 22:28.

Mar 8 2018

Cleaning the mesh events
336316d7a2a3
·richart on Mar 8 2018, 10:14.
adding helper accessor in the mesh
dcd8550a5b85
·richart on Mar 8 2018, 10:14.
Cleaning useless events
d32942878135
·richart on Mar 8 2018, 03:31.

Mar 6 2018

adding per element accessors
a6a3c575dfe9
·richart on Mar 6 2018, 21:08.

Mar 4 2018

Compilation warning with clang
2a7c8e69acb5
·richart on Mar 4 2018, 03:42.

Mar 3 2018

Bug fix in the cohesive elements
661fbad816c4
·richart on Mar 3 2018, 04:48.

Feb 27 2018

Bug fix in elementtypemap initialize
ca7b773f65ce
·richart / gallyamov on Feb 27 2018, 11:35.

Feb 23 2018

Rewrote the headers of the files in src
2d7e93b72235
·richart on Feb 23 2018, 22:03.
Linted everything 'arc --lint --erverything'
80101ddd6e28
·richart on Feb 23 2018, 15:42.
Merge branch 'features/dofs-separation-rewrote' of c4science…
d6399e287845
·richart on Feb 23 2018, 10:49.
Compilation problem with gcc 5
9d1b65edf4f1
·richart on Feb 23 2018, 10:14.

Feb 20 2018

No harsh termination, only exceptions thrown
7064d0e0638c
·richart on Feb 20 2018, 15:34.
more flexible ElementTypeMapArray initializers
ada11297d246
·frerot on Feb 20 2018, 15:03.
Add a functor for the number component in ElementTypeMap initialize
c9f2947f9e4b
·richart on Feb 20 2018, 11:28.
correcting parallel cohesive element, still not working state
2462423f9d19
·richart on Feb 20 2018, 02:18.

Feb 19 2018

Adding cohesive element tests
641a0529e826
·richart on Feb 19 2018, 02:28.

Feb 9 2018

Merge branch 'features/embedded-rewrote' into features/dofs-separation-rewrote
19a651159638
·frerot on Feb 9 2018, 15:04.

Feb 7 2018

python unittest for patchtest
4cc88ef4c591
·anciaux on Feb 7 2018, 16:38.

Feb 5 2018

removed overload of insert function for ElementTypeMap
34c26cd37d81
·frerot on Feb 5 2018, 13:50.
made new embedded compile
09f92b90ea34
·frerot on Feb 5 2018, 12:11.

Feb 4 2018

Updating the doxygen
77284bc15f07
·richart on Feb 4 2018, 15:33.

Feb 1 2018

python interface compiling: need to check compatibility with scripts
022b6ea9aedf
·anciaux on Feb 1 2018, 10:47.
include the python interface modifications: compiles again
4d83e6b07478
·anciaux on Feb 1 2018, 09:21.

Jan 31 2018

removed for_each_element plural
8b32aeebc464
·frerot on Jan 31 2018, 18:02.

Jan 30 2018

Bug fix + code cleaning
8dd92f49f5d7
·richart on Jan 30 2018, 01:13.

Jan 26 2018

Changed debug level of mesh facet messages
66495d9b7634
·richart on Jan 26 2018, 16:44.

Jan 22 2018

Warning correction while compiling in Release
247d65021529
·richart on Jan 22 2018, 01:53.
correction for dumper compilation
c89541f53b1c
·richart on Jan 22 2018, 01:07.

Jan 16 2018

Passing compilation with intel compiler
dbab3a696525
·richart on Jan 16 2018, 20:09.
Changes to make the heat transfer test compile
8adf9a558516
·richart on Jan 16 2018, 10:30.

Jan 10 2018

Preparing gtest cohesive element tests
a89df6d30a92
·richart on Jan 10 2018, 15:24.