Diffusion akantu (features/changes-to-address-joss-review) History

rAKA/cmake
features/changes-to…0705055d933a942762901a8…

Jul 3 2019

Fixed compilations of examples
8a9c0bc03921
·richart on Jul 3 2019, 10:42.

Jun 16 2019

Bug fix in the python patch tests
5adfe4547377
·richart on Jun 16 2019, 20:10.
Merge branch 'features/pybind11' of c4science:/diffusion/AKAPRIV/akantu-private…
59acc25aa216
·richart on Jun 16 2019, 12:50.

Jun 15 2019

Merge branch 'master' into features/pybind11
0e4984f5a64d
·richart on Jun 15 2019, 18:24.

Jun 12 2019

Compiling with clang with -fsanitize=memory
36cb05800fb2
·richart on Jun 12 2019, 18:28.

Jun 5 2019

Merge branch 'master' into features/petsc
69c3f4c90ff0
·richart on Jun 5 2019, 17:47.

May 9 2019

change path and last example
3ba30aa1a99e
·anciaux on May 9 2019, 13:44.
change a path
f472fed08c4c
·anciaux on May 9 2019, 13:26.
removing swig
84d2362e4f31
·anciaux on May 9 2019, 13:15.

May 8 2019

Force format 2 for generated msh files with CMake scripts
636c125962e1
·anciaux on May 8 2019, 15:08.
Merge branch 'master' into features/pybind11
7e653f041bc2
·anciaux on May 8 2019, 13:11.

Apr 8 2019

fix bad merge
ba1d770459b9
·anciaux on Apr 8 2019, 13:13.

Mar 7 2019

This seams to work to assemble with multiple dofs and in parallel (needs a bit…
2ff5e44cc57d
·richart on Mar 7 2019, 16:14.

Feb 26 2019

Adding modules for debug
89582c779053
·richart on Feb 26 2019, 12:48.

Feb 13 2019

Adding traction test for Mazars
431ad889f5c5
·richart on Feb 13 2019, 14:43.

Feb 8 2019

Correction in the ci handling
5424eed87428
·richart on Feb 8 2019, 15:16.

Jan 29 2019

Installing arcanist by hand in the dockerfile
d0b37677147c
·richart on Jan 29 2019, 11:06.

Jan 2 2019

PETSc compiles adding SolverVector
05a352d13d99
·richart on Jan 2 2019, 17:42.

Dec 28 2018

Bug fix in petsc detection
8d21af83eceb
·richart on Dec 28 2018, 16:14.
Updating FindPETSc
ec18546f5fb3
·richart on Dec 28 2018, 15:44.

Nov 9 2018

Adding -ggdb3 as compilation flags
e29cbbbae46b
·richart on Nov 9 2018, 15:58.

Nov 6 2018

try more advances debug flags
195c4be2fa7a
·richart on Nov 6 2018, 17:02.

Oct 31 2018

Bootstraping the pybind11 code
0cf2524f8f9e
·richart on Oct 31 2018, 10:30.

Oct 18 2018

Protecting path
adda5cb009fb
·richart on Oct 18 2018, 11:28.

Sep 5 2018

Making compilation work with gcc >= 8
a835a3214c48
·richart on Sep 5 2018, 13:48.

Apr 3 2018

Adapting the test driver to handle extra option for test executable
b2b4f9e7a282
·richart on Apr 3 2018, 20:40.
Trying to analyze gtest results separately
e8d2352f1bba
·richart on Apr 3 2018, 16:51.

Mar 15 2018

Adding info on how to compil a external simu
9f07cdd93b98
·richart on Mar 15 2018, 00:47.
More correction to install
6708a9d70aaa
·richart on Mar 15 2018, 00:14.
Correcting the make install phase
1a8e8899ec36
·richart on Mar 15 2018, 00:10.

Mar 14 2018

Cleaning doc + install files
8d7094396ab7
·richart on Mar 14 2018, 02:43.

Mar 8 2018

updating petty printer
3caa91e71fc4
·richart on Mar 8 2018, 10:13.

Mar 7 2018

pretty printers for elementtypemaparray
00f0116d10ac
·richart on Mar 7 2018, 04:26.

Mar 4 2018

Change in the find package for mpi
26cdb9f88efd
·richart on Mar 4 2018, 18:26.
Allowing to run test in parallel
1216564570fe
·richart on Mar 4 2018, 03:41.

Mar 1 2018

bug fix for PARALLEL test
b140c4629da0
·richart / anciaux on Mar 1 2018, 19:04.

Feb 23 2018

Hiding not_optional packages
1fdc97ca9580
·richart on Feb 23 2018, 12:44.

Feb 13 2018

Merge branch 'features/dofs-separation-rewrote' of ssh://c4science.
c2c086860d0f
·milanese on Feb 13 2018, 12:16.
Correction in the package system for external libraries
0d097d2981c1
·richart / milanese on Feb 13 2018, 12:15.

Feb 10 2018

Correcting test_engine
5eab81db9bc8
·richart on Feb 10 2018, 14:10.

Feb 5 2018

updating python tests
abcfa49b9bc0
·richart on Feb 5 2018, 01:39.

Feb 3 2018

Marking more options as advanced
8e6f22daf2f3
·richart on Feb 3 2018, 15:18.

Jan 29 2018

Making gtest and pybind11 coexist in debug mode...
aabda9b7e81b
·richart on Jan 29 2018, 00:03.

Jan 26 2018

Cleaning the tests and adding pentahedron
573a7a2f9770
·richart on Jan 26 2018, 01:14.

Jan 25 2018

ElementTypeMapArray pretty printers
66d3fdaf8414
·richart on Jan 25 2018, 00:11.

Jan 24 2018

Correcting package dependencies for gtest
5b2cba4445bb
·richart on Jan 24 2018, 17:54.

Jan 23 2018

Forcing CXX_STANDARD on gtest
403e909ee986
·richart on Jan 23 2018, 19:23.
Cleaning FindMumps
520469a2d51f
·richart on Jan 23 2018, 00:00.

Jan 18 2018

Continuation in the includes handling
9ebe1a77fdb2
·richart on Jan 18 2018, 19:32.

Jan 16 2018

Changed the way includes are handled for external packages
cafb0c72846b
·richart on Jan 16 2018, 20:08.
Pybind11 handling in test modified to be more conditional
52d80f8f4156
·richart on Jan 16 2018, 10:29.

Jan 12 2018

Some improvements on the cmake system
5b37fc21c50a
·richart on Jan 12 2018, 15:36.
Improving the treatment of includes and external libraries
9b780f2f40a5
·richart on Jan 12 2018, 14:03.

Jan 10 2018

Modified the way pybind11 and google test are included in akantu
426023b63d6d
·richart on Jan 10 2018, 10:44.

Dec 22 2017

Added tests for precomputation of finite element engine
469aa17f263e
·richart on Dec 22 2017, 03:14.

Dec 21 2017

Some minor changes to help to compile
7bd4b48b1a38
·richart on Dec 21 2017, 04:19.

Dec 6 2017

Bug fix in register_gtest_test when package is not activated
aafac5ad1ee0
·richart on Dec 6 2017, 16:06.

Dec 5 2017

improving the material selectors
fa6a1eba1efe
·richart on Dec 5 2017, 22:45.

Dec 3 2017

Merge branch 'features/dofs-separation-rewrote' of c4science.ch…
a166e113211b
·• arichart on Dec 3 2017, 23:07.
Correcting a bug in the zip iterators, r-value returned by iterators where lost
94f4c38204cd
·richart on Dec 3 2017, 18:08.

Nov 30 2017

Rewrote the gtest compilation properly
e19c1ac38125
·richart on Nov 30 2017, 20:32.

Nov 14 2017

Changed FEEngine tests to google-test
2e7b4dde3d73
·richart on Nov 14 2017, 19:04.

Nov 9 2017

Adding dependency with google-test and generating meta tests with GTEST option
d8011f888eb0
·richart on Nov 9 2017, 00:00.

Nov 8 2017

clang-tidy first pass of auto-fixes
3cb848d814e7
·richart on Nov 8 2017, 02:27.

Nov 7 2017

Merge branch 'master' into features/dofs-separation-rewrote
cda04693fb4b
·richart on Nov 7 2017, 14:36.
Small bug fix in cmake
e74c62be672c
·richart on Nov 7 2017, 13:56.

Oct 11 2017

Modernization of the code + typo correction
e25f4e309c2e
·richart on Oct 11 2017, 16:34.

Oct 2 2017

Adding iohelper as a subtree + some bug fixes
aa3ceb21cd72
·D154
·richart on Oct 2 2017, 16:29.

Sep 27 2017

greater_equal replaced with greater
cc5ee485aa20
·anciaux on Sep 27 2017, 13:33.

Sep 25 2017

fixed infinite loop in FindMumps
618c6ccf75bb
·richart / frerot on Sep 25 2017, 11:20.

Sep 11 2017

lot of tests fixes
28f5cbe13756
·richart on Sep 11 2017, 16:34.

Aug 22 2017

Adapting to new gccs for debugging (no-pie)
2fc307bdeb90
·richart on Aug 22 2017, 11:53.

Aug 13 2017

Changes getSize to size for compatibility with STL containers
a2a185177344
·richart on Aug 13 2017, 19:05.

Aug 11 2017

bug fixing
65271e213fa5
·richart on Aug 11 2017, 02:21.
tidying the code
022300508462
·richart on Aug 11 2017, 02:21.

Jun 16 2017

Adding named_argument capability
7c7a57204949
·richart on Jun 16 2017, 15:33.

Jun 15 2017

Check version of gmsh
2e9e362925f6
·richart on Jun 15 2017, 16:09.

Jun 14 2017

Merge remote-tracking branch 'origin/master' into features/dofs-separation…
e5a6225ca95a
·richart on Jun 14 2017, 13:28.

Jun 12 2017

Bug fix in the detection of esmumps
dedb4aab3e66
·richart on Jun 12 2017, 16:00.
Refactoring the mumps dependency code
da6f7fbde48f
·richart on Jun 12 2017, 11:29.
Adaptation to follow the latest versions of FindBLAS.cmake
c2b8ef7965d0
·richart on Jun 12 2017, 11:28.
Another modifications to compensate for shitty build systems
181eaed94492
·richart on Jun 12 2017, 11:28.
Imporved the dependecy detection for runtime on macosx
c936ca75860a
·D122
·richart on Jun 12 2017, 11:28.
Adding chrono from c++11 when possible
599d7cd82b35
·richart on Jun 12 2017, 11:27.
Modified libraries detection since Homebrew compiles fake dynamic libaries and…
268be26a0734
·D107
·richart on Jun 12 2017, 11:26.

Jun 2 2017

Forced c++14 as a standard
298222cbaef9
·richart on Jun 2 2017, 16:58.

Jun 1 2017

Adding clang-tidy to clean the code
ac6c3960f3b2
·richart on Jun 1 2017, 13:20.

May 15 2017

Addapting the way parallel tests are spawned
17a9cbbab5d7
·richart on May 15 2017, 14:34.

May 5 2017

small improvement in array pretty printer
e0e37d880abf
·richart on May 5 2017, 15:44.

Apr 26 2017

Adapting the pretty-printers
567f5caf5b7a
·richart on Apr 26 2017, 13:59.

Feb 14 2017

Adding missing doc
bf3387644b19
·richart on Feb 14 2017, 14:25.

Dec 7 2016

starting to modify the tests for the new API, + bug fixes on autos ans adding…
06e82afebd3a
·richart on Dec 7 2016, 13:55.

Dec 2 2016

Merge branch 'master' into features/dofs-separation-rewrote
1b4820c1db0b
·richart on Dec 2 2016, 17:38.
Rewrote synchronizer interface (need testing)
cafceb59140e
·richart on Dec 2 2016, 17:27.

Aug 6 2016

modifs related to the new test of parallel cohesive element insertion
6897e0f0db58
·fabarras on Aug 6 2016, 14:05.

Jul 26 2016

modif to enable choice of examples to compile
dba05e9104ad
·fabarras on Jul 26 2016, 15:45.

Jun 29 2016

New solvers in solid_mechanics_model
0afd2f20c3e2
·richart on Jun 29 2016, 02:45.

Apr 25 2016

Merge branch 'master' into dofs-separation-rewrote
e817679d7df6
·richart on Apr 25 2016, 21:17.
Adding gdb pretty printers in akantu
413b53313bb8
·richart on Apr 25 2016, 01:51.
Still some fixes for add_akantu_simulation
baf96585b0ea
·richart on Apr 25 2016, 01:51.