Diffusion akantu (features/changes-to-address-joss-review) History

changes-to…8178b1e40e105fadcfb7d37…

Feb 9 2021

Adding MeshAccessor to python and adding posibility to resize meshes
8178b1e40e10
·richart on Feb 9 2021, 00:41.

Feb 8 2021

Initializing properly the element_material
d3f488d7feee
·richart on Feb 8 2021, 20:58.

Feb 5 2021

Added functions to better interact with the material torage of the…
81d5d634d296
·Philip Mueller on Feb 5 2021, 07:14.
Modified the `addMaterial()` function of the `StructuralMechanicsModel`.
bd14ee9d4261
·Philip Mueller on Feb 5 2021, 07:14.
Bug fix of dynamics structural elements
e2a9b85e876e
·richart on Feb 5 2021, 00:22.

Feb 1 2021

correcting shapes in _bernouilli beams
fc805b05db5c
·richart on Feb 1 2021, 09:24.
A bit more cleaning
da2c2d3ca841
·richart on Feb 1 2021, 09:20.

Jan 28 2021

Assembling structural elements mass matrix in FEEngine
48c1c478dbae
·richart on Jan 28 2021, 23:46.
Compilation error on ubuntu corrected
96c2c56bc646
·richart on Jan 28 2021, 19:03.
Reactivating mass matrix computation for structural elements
b74014a5dfe8
·richart on Jan 28 2021, 13:00.

Jan 27 2021

Reactivating boundary forces code for structural elements
39c17a8c4fe7
·richart on Jan 27 2021, 00:36.

Nov 17 2020

Bug fix when not in debug
e9bcfea33128
·richart on Nov 17 2020, 23:20.
Protecting lambda not used in NDEBUG
ca8b0916b687
·richart on Nov 17 2020, 14:37.
Removing warning in py_material RTFM...
e13ac132d985
·richart on Nov 17 2020, 14:35.
compilation bug fix when mpi is off
2491c2214859
·richart on Nov 17 2020, 12:57.
some linting
10560320f49d
·richart on Nov 17 2020, 12:57.
removing warnings in py_material
8f1d14ec176b
·richart on Nov 17 2020, 12:57.

Nov 16 2020

Bug fix in the eigen-gradu, with cohesive elements
30d41afebedb
·richart on Nov 16 2020, 23:02.

Nov 13 2020

Minor improvements to help debugging
92684d20aee0
·richart on Nov 13 2020, 18:26.
bug fix in mesh distribution
e6cb89c743c8
·richart on Nov 13 2020, 18:26.
Bug fix in size computation
7fe6b3c3c105
·richart on Nov 13 2020, 18:25.
bug fix in the insertion of 3d elements
cf7c4837cb90
·richart on Nov 13 2020, 18:25.
Full rewrite of cohesive insertion to ensure the order of insertion across…
36b61f922c3e
·richart on Nov 13 2020, 18:25.
Bug fix
e67b19e9c27e
·richart on Nov 13 2020, 18:25.
Accounting for stupid version of compilers
996fba290d56
·richart on Nov 13 2020, 18:25.
Remaining semicolon
e430cc0cba3c
·richart on Nov 13 2020, 18:25.
clang-tidy
2494dc4e9df3
·richart on Nov 13 2020, 18:25.
Bug fix in non_local cleanup
a7cedbf9906c
·richart on Nov 13 2020, 18:25.
A bit of cleanup of the code
18bc82b3bd6a
·richart on Nov 13 2020, 18:25.
Change in pybind11 compilation
d0b63cea21e3
·richart on Nov 13 2020, 12:03.
Bug fixes and compilation warning cleaning:
1f6666b97403
·richart on Nov 13 2020, 12:03.
[ci] Extanding the ci:
1ca3bf659e84
·richart on Nov 13 2020, 12:03.
Adding git information to the code
5cc4b76ac4b6
·richart on Nov 13 2020, 12:02.
Merge branch 'master' of c4science:/diffusion/AKAPRIV/akantu-private into master
8f5380fd35d3
·richart on Nov 13 2020, 09:54.

Oct 8 2020

Changed the way eigen grad u can be set from the material file
baacd6b48076
·richart on Oct 8 2020, 18:58.
register the eigen gradu as a material parameter
5c8a4684bc7f
·anciaux on Oct 8 2020, 15:33.

Jul 21 2020

Extanding the python interface of FEEngine and cohesive element
f7d749d67510
·richart on Jul 21 2020, 09:29.

Jun 23 2020

remove prank and psize from communicator.hh
3fb8ce4a66af
·anciaux on Jun 23 2020, 14:06.

Jun 17 2020

fix rotation wrongly inserted in the natural coordinates for tetrahedron4
04f84f3897ff
·anciaux on Jun 17 2020, 17:24.

Jun 8 2020

Bug fixed : multiple cohesive materials in extrinsic insertion
03d3e280c971
·pundir on Jun 8 2020, 18:14.

May 6 2020

Merge branch 'master' of gitlab.com:akantu/akantu
95f643fbb529
·richart on May 6 2020, 20:20.
Modifications for the documentation
f2b54f6e0331
·richart on May 6 2020, 20:17.

Mar 25 2020

Merge branch 'master' of gitlab.com:akantu/akantu
a80e6d048c5a
·anciaux on Mar 25 2020, 16:46.
if sequential, should exchange information for the pbc
f12826f744d5
·anciaux on Mar 25 2020, 16:29.

Mar 24 2020

Merge branch 'master' of gitlab.com:akantu/akantu
9d71cf55d088
·richart on Mar 24 2020, 09:06.
small bug fix
e8a7879155ab
·richart on Mar 24 2020, 09:06.

Mar 18 2020

removes a wrong clear of elastic constants in anisotropic law
4b1996c1a5f2
·anciaux on Mar 18 2020, 18:41.
allow to initialize the material manually
44a04848e239
·anciaux on Mar 18 2020, 16:17.
correct uninitialized values from materials
1ca2a17aa807
·anciaux on Mar 18 2020, 16:16.

Mar 15 2020

some changes to make PBC work again in sequential: to review
f2e4a0fa4491
·anciaux on Mar 15 2020, 09:55.

Mar 13 2020

correct a memory fault problem with the pbc
4da59a0e63c4
·anciaux on Mar 13 2020, 08:35.

Mar 9 2020

set tag upper bound based in MPI_COMM_WORLD
d751a95ffe34
·anciaux on Mar 9 2020, 17:22.

Mar 6 2020

extend communicator creation in akantu
30ae51bad185
·anciaux on Mar 6 2020, 18:20.

Feb 18 2020

Adding a possibility to insert cohesive element only in some
684f4e9f9da5
·richart on Feb 18 2020, 13:02.

Jan 23 2020

Installing python binding and akantu-iterators properly
8b12a8c50daf
·richart on Jan 23 2020, 18:07.

Jan 22 2020

improving the install process
4a17d216cedb
·richart on Jan 22 2020, 18:29.

Jan 15 2020

factorizing scatter/gather from dof_synchronizer to synchronizer_impl
72bc1b60d6fa
·richart on Jan 15 2020, 13:24.

Dec 20 2019

Wrongly protected compilation
3741ee66d19a
·richart on Dec 20 2019, 14:14.

Dec 18 2019

Bug fix in the export of the target akantu
38689942d5bb
·richart on Dec 18 2019, 14:45.

Dec 13 2019

extanding SparseMatrix and DOFManager interface in python
0ff570ffbf37
·richart on Dec 13 2019, 15:33.

Dec 11 2019

Merge branch 'master' of c4science:/diffusion/AKAPRIV/akantu-private
9af5e8823b34
·richart on Dec 11 2019, 18:37.
The fix for clang breaks gcc
238e081bfa3e
·richart on Dec 11 2019, 18:36.
fixed warning [-Wempty-body] in Mesh::read
b9311d8ff17e
·frerot on Dec 11 2019, 17:35.
bug fix to compile on clang
ff7c24cea62e
·richart on Dec 11 2019, 15:41.

Dec 4 2019

do not buildFacets in between constructor and initFull...
d5726d36cee2
·richart on Dec 4 2019, 21:08.
bug fix in case the facet is a boundary facet
fccb500bf91a
·richart on Dec 4 2019, 21:07.
avoiding assigning materials to "no element"
0e809a7ec2c3
·richart on Dec 4 2019, 18:21.

Dec 3 2019

Adding a missing S
5ac36c978a89
·richart on Dec 3 2019, 18:29.

Dec 2 2019

Compilation fix when structural elements are not activated
092b290520c2
·richart on Dec 2 2019, 14:51.

Nov 29 2019

Reverted a changes that make cohesive element insertion fail in parallel
549557bb86a5
·richart on Nov 29 2019, 18:09.
Securing accessors on pointers
9bdc4bbe7ab0
·richart on Nov 29 2019, 18:09.

Nov 27 2019

Corrected num iter count
dcdb1495214c
·richart on Nov 27 2019, 18:54.
Extending feengine generic api
a7b944d6c817
·richart on Nov 27 2019, 18:54.
Merge branch 'master' of c4science.ch:/diffusion/AKAPRIV/akantu-private
525799376c2e
·richart on Nov 27 2019, 15:44.
Storing step before solve restoring if solve failed
2d7706576326
·richart on Nov 27 2019, 15:38.
Updating cmake
3b5ad8bc6ce8
·richart on Nov 27 2019, 15:38.
Rewriting the mesh to dual graph generation algorithm
e0974cf6bcc5
·richart on Nov 27 2019, 15:38.
Some cleaning and modernization of the code
ba6837e25b9b
·richart on Nov 27 2019, 15:38.
minor corrections
c8376fd17f15
·richart on Nov 27 2019, 14:10.
Merge branch 'master' of c4science:/diffusion/AKAPRIV/akantu-private
6fc95097d887
·richart on Nov 27 2019, 14:06.

Nov 11 2019

Cleaning unused parameters
295fdd9828a3
·richart on Nov 11 2019, 16:03.

Oct 30 2019

cleaning repo to move to sub repo
5cff0fa4bf8f
·richart on Oct 30 2019, 16:32.

Oct 28 2019

Make akantu compile again on ubuntu xenial
67bc28894cfb
·richart on Oct 28 2019, 21:24.

Oct 4 2019

onElementAdded only for elements of the correct dimension
5dcbd68a7b1a
·richart on Oct 4 2019, 17:09.
Moving the flipFacet call to the mesh facet creation code
dd086a28369f
·richart on Oct 4 2019, 16:50.
minor enhancements
d95b4e96bb27
·richart on Oct 4 2019, 15:59.
adding info to mesh events
ff09fbb08786
·richart on Oct 4 2019, 15:58.
Tangent matrix re-computation a bit more clever
afa9cc913c79
·richart on Oct 4 2019, 15:57.

Sep 17 2019

Bug fix in exclusiveScan in sequential
60e435467a35
·richart on Sep 17 2019, 13:09.

Sep 4 2019

cleaning the code
863d3f407e40
·richart on Sep 4 2019, 17:41.

Aug 27 2019

Do not compute shape derivatives on all type in onElementsAdded
f7fc640b45bc
·richart on Aug 27 2019, 16:55.
linting to make jenkins happy again
155d19a093b4
·richart on Aug 27 2019, 16:33.
missed the structural shape functions
8fec248f8b4b
·richart on Aug 27 2019, 16:32.
Limiting the shape functions and integrator to one dimension
5a28b410980b
·richart on Aug 27 2019, 16:19.

Aug 21 2019

modernizing the code
3d0f16c20130
·richart on Aug 21 2019, 12:47.
adding some debugging
69c31979d23a
·richart on Aug 21 2019, 12:47.

Aug 20 2019

bug fix in the profil construction
a58bd8d06aea
·richart on Aug 20 2019, 16:21.
Removing useless function + bug fix
912d812b730d
·richart on Aug 20 2019, 16:08.

Aug 14 2019

adding types capabilities
534c6752bee0
·richart on Aug 14 2019, 18:20.
Correcting some stuff in the dumpers
a55298ef88a1
·richart on Aug 14 2019, 18:19.

rAKA/srcfeatures/changes-to…8178b1e40e105fadcfb7d37…

Feb 9 2021

Feb 8 2021

Feb 5 2021

Feb 1 2021

Jan 28 2021

Jan 27 2021

Nov 17 2020

Nov 16 2020

Nov 13 2020

Oct 8 2020

Jul 21 2020

Jun 23 2020

Jun 17 2020

Jun 8 2020

May 6 2020

Mar 25 2020

Mar 24 2020

Mar 18 2020

Mar 15 2020

Mar 13 2020

Mar 9 2020

Mar 6 2020

Feb 18 2020

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Jan 15 2020

Dec 20 2019

Dec 18 2019

Dec 13 2019

Dec 11 2019

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Dec 2 2019

Nov 29 2019

Nov 27 2019

Nov 11 2019

Oct 30 2019

Oct 28 2019

Oct 4 2019

Sep 17 2019

Sep 4 2019

Aug 27 2019

Aug 21 2019

Aug 20 2019

Aug 14 2019

rAKA/src
features/changes-to…8178b1e40e105fadcfb7d37…