Diffusion akantu (features/changes-to-address-joss-review) History

changes-to…2d34133da9888a86bef69e9…

May 14 2021

Correcting documentation
2d34133da988
·richart on May 14 2021, 11:18.
Linting the code and applying clang-tidy corrections
a52b94276329
·richart on May 14 2021, 11:13.
Removing useless parameter that comes from a copy/paste...
cc28db023977
·richart on May 14 2021, 11:13.
Reordering methods
7b8c44876f35
·richart on May 14 2021, 10:29.

Apr 28 2021

fixed override functions
11b13960905f
·pundir on Apr 28 2021, 13:06.

Apr 2 2021

removed the memory part from the phasefield model
a4358f0535b7
·pundir on Apr 2 2021, 08:56.
Merge branch 'master' into features/phasefield
00d14211d024
·pundir on Apr 2 2021, 01:37.
added eta parameter to avoid full degradation of elastic energy
34d21a7b59df
·pundir on Apr 2 2021, 01:28.
cleaning the code and adding descriptions to the classes
9d9fd80295fa
·pundir on Apr 2 2021, 01:27.

Mar 29 2021

give better default to the fragmentation_manager tools
8a42a425df9d
·anciaux on Mar 29 2021, 12:24.

Mar 16 2021

Merge branch 'features/material_internals_memory' into 'master'
e1a94b307393
·richart on Mar 16 2021, 15:24.

Mar 15 2021

adding a reference to remove a bug visible with pre-strained materials
e7a551f32e9a
·anciaux on Mar 15 2021, 21:50.
make the compute boundary loads compile and run in structural mechanics
48cd41bb1b6d
·richart on Mar 15 2021, 20:54.
silenced override warnings on HeatTransferModel dump() overloads
d1204ff2107e
·frerot on Mar 15 2021, 15:11.

Mar 13 2021

Fixing dumper warnings
9d302f1bae82
·richart on Mar 13 2021, 23:38.
Adapting due to changes in structural mechanics
64cf152a54e1
·richart on Mar 13 2021, 19:14.
Merge branch 'master' into features/material_internals_memory
bc650421eb69
·richart on Mar 13 2021, 15:31.
Merge branch 'master' into features/material_internals_memory
526b254b52f6
·richart on Mar 13 2021, 14:42.

Mar 12 2021

Missing include
dc620ac87a26
·richart on Mar 12 2021, 23:24.
Merge branch 'master' into bugfixes/dynamics_structural_mechnanics
fcf9aaa26120
·richart on Mar 12 2021, 23:01.

Mar 11 2021

Bug fix and refactoring
42afd1028858
·richart on Mar 11 2021, 23:40.

Mar 10 2021

Reactivating the default values for arrays in models
91a164c86eca
·richart on Mar 10 2021, 18:37.
Moving code around
c66842af1879
·richart on Mar 10 2021, 09:25.
Fix element acces via getElementIterable
b40ed4c089ac
·tdroch / richart on Mar 10 2021, 09:10.
Adding energy computation per element group
f672a1a401c6
·richart on Mar 10 2021, 09:10.
Getting rid of the static memory
a724d3f2390c
·richart on Mar 10 2021, 00:01.

Mar 8 2021

Removed a debug output.
b39b7fc9da15
·Philip Mueller, HS on Mar 8 2021, 17:15.

Mar 6 2021

Adding energy computations
ed955d571096
·richart on Mar 6 2021, 19:30.

Mar 4 2021

Adding capability to register materials by name
5443fca997a8
·richart on Mar 4 2021, 13:50.

Mar 3 2021

Bug Fixed : ill-Conditioning of stiffness matrix corrected
006b83c5ba82
·pundir on Mar 3 2021, 01:09.

Mar 2 2021

added python interface for defining new user-defined solvers
212fe077251d
·pundir on Mar 2 2021, 01:05.

Mar 1 2021

functionality to defined solver type for solid model during coupling
5842df242385
·pundir on Mar 1 2021, 17:43.

Feb 28 2021

Bug Fixed : internalforces should be zeored and not cleared
285963f471a9
·pundir on Feb 28 2021, 15:32.

Feb 26 2021

update material phasefield override functions
7aa518d0af84
·pundir on Feb 26 2021, 22:33.
Merge remote-tracking branch 'upstream/master' into features/phasefield
ff5e68dcafd8
·pundir on Feb 26 2021, 16:02.
Bug Fixed : multiple material reading
857e91531d8e
·pundir on Feb 26 2021, 10:10.
test for multi material added
3fb5d4d98714
·pundir on Feb 26 2021, 01:24.

Feb 25 2021

Bug found in the structural mechanics model
5671899d4a2a
·richart on Feb 25 2021, 00:15.

Feb 24 2021

Adding solvers to the python interface
dfa1d3c6e370
·richart on Feb 24 2021, 12:59.
multi-material functionality for phasefield added
fbdb0f3b5737
·pundir on Feb 24 2021, 01:11.

Feb 9 2021

restored hermite shapes
0af64787b61a
·richart on Feb 9 2021, 00:42.

Feb 8 2021

Initializing properly the element_material
2acbdaaf8cd2
·richart on Feb 8 2021, 20:58.

Feb 5 2021

Added functions to better interact with the material torage of the…
b50bd31e0897
·Philip Mueller on Feb 5 2021, 07:14.
Modified the `addMaterial()` function of the `StructuralMechanicsModel`.
79f4c1da6356
·Philip Mueller on Feb 5 2021, 07:14.
Bug fix of dynamics structural elements
07f0ddac6c74
·richart on Feb 5 2021, 00:22.

Feb 1 2021

A bit more cleaning
7a4e9ed7d487
·richart on Feb 1 2021, 09:20.

Jan 28 2021

Compilation error on ubuntu corrected
46d4f944ae1c
·richart on Jan 28 2021, 19:03.
Reactivating mass matrix computation for structural elements
cd7dcdf942c9
·richart on Jan 28 2021, 13:00.

Jan 27 2021

Reactivating boundary forces code for structural elements
1ee60b339902
·richart on Jan 27 2021, 00:36.

Nov 17 2020

Bug fix when not in debug
5f8cd7967de5
·richart on Nov 17 2020, 23:20.
some linting
081da3e5b7c6
·richart on Nov 17 2020, 12:57.

Nov 16 2020

Bug fix in the eigen-gradu, with cohesive elements
10664658c20c
·richart on Nov 16 2020, 23:02.

Nov 13 2020

bug fix in mesh distribution
da19e76c141c
·richart on Nov 13 2020, 18:26.
Full rewrite of cohesive insertion to ensure the order of insertion across…
19086cd4e3db
·richart on Nov 13 2020, 18:25.
clang-tidy
afd7269e93f5
·richart on Nov 13 2020, 18:25.
Bug fix in non_local cleanup
ae5a25c2bfad
·richart on Nov 13 2020, 18:25.
Bug fixes and compilation warning cleaning:
1ba2ccb21bb6
·richart on Nov 13 2020, 12:03.
Merge branch 'master' of c4science:/diffusion/AKAPRIV/akantu-private into master
cfdd63f214a7
·richart on Nov 13 2020, 09:54.

Oct 8 2020

Changed the way eigen grad u can be set from the material file
33c80c6b352e
·richart on Oct 8 2020, 18:58.
register the eigen gradu as a material parameter
af9a0441ec8d
·anciaux on Oct 8 2020, 15:33.

Jul 21 2020

Extanding the python interface of FEEngine and cohesive element
ca74d069169a
·richart on Jul 21 2020, 09:29.

Jun 19 2020

Conflict with master resolved
ebae9abcee87
·pundir on Jun 19 2020, 21:34.
change in solid mechanics model file do not know
6942cd6ca300
·pundir on Jun 19 2020, 21:30.
phasefield selector compiles
8070a024e3e5
·pundir on Jun 19 2020, 21:29.

Jun 8 2020

Bug fixed : multiple cohesive materials in extrinsic insertion
14d51fa1489c
·pundir on Jun 8 2020, 18:14.

May 29 2020

changes to internal field to accept any Material like class
c569c48c9bae
·pundir on May 29 2020, 22:17.

May 6 2020

Modifications for the documentation
d2aec9116f8f
·richart on May 6 2020, 20:17.

Mar 24 2020

Merge branch 'master' of gitlab.com:akantu/akantu
058be8fff920
·richart on Mar 24 2020, 09:06.
small bug fix
acfed465d647
·richart on Mar 24 2020, 09:06.

Mar 18 2020

removes a wrong clear of elastic constants in anisotropic law
c3a69f376315
·anciaux on Mar 18 2020, 18:41.
allow to initialize the material manually
6253ea6dfda4
·anciaux on Mar 18 2020, 16:17.
correct uninitialized values from materials
399f5d332b58
·anciaux on Mar 18 2020, 16:16.

Mar 15 2020

some changes to make PBC work again in sequential: to review
727f18940ec2
·anciaux on Mar 15 2020, 09:55.

Feb 22 2020

added synchronization tags for better parallelization
db48e749ac96
·pundir on Feb 22 2020, 22:11.

Feb 21 2020

afterSolveStep in phase_field_model.hh changed
f500f4aafa06
·pundir on Feb 21 2020, 16:53.
changed afterSolverStep initialization
79949d11664c
·pundir on Feb 21 2020, 16:47.
conflict with master resolved
c3b8aecba3ce
·pundir on Feb 21 2020, 13:25.
working in parallel
1945e593c93f
·pundir on Feb 21 2020, 13:21.

Feb 19 2020

working on parallelization
2b66ebfbfb54
·pundir on Feb 19 2020, 21:14.

Dec 20 2019

Wrongly protected compilation
f600d5b63508
·richart on Dec 20 2019, 14:14.

Dec 4 2019

do not buildFacets in between constructor and initFull...
29c9bb06c2ba
·richart on Dec 4 2019, 21:08.
avoiding assigning materials to "no element"
eb4a47db35a1
·richart on Dec 4 2019, 18:21.

Nov 29 2019

Reverted a changes that make cohesive element insertion fail in parallel
f6a5d382c9cb
·richart on Nov 29 2019, 18:09.
Securing accessors on pointers
2385e94fa9ac
·richart on Nov 29 2019, 18:09.

Nov 27 2019

Corrected num iter count
0c8304556d60
·richart on Nov 27 2019, 18:54.
Extending feengine generic api
f501efc5a1a2
·richart on Nov 27 2019, 18:54.
Merge branch 'master' of c4science.ch:/diffusion/AKAPRIV/akantu-private
59faf9244eb0
·richart on Nov 27 2019, 15:44.
Storing step before solve restoring if solve failed
125fb50f0497
·richart on Nov 27 2019, 15:38.
Some cleaning and modernization of the code
f570859554d8
·richart on Nov 27 2019, 15:38.
Merge branch 'master' of c4science:/diffusion/AKAPRIV/akantu-private
1edb8bd9845a
·richart on Nov 27 2019, 14:06.

Nov 11 2019

Cleaning unused parameters
d40b01128a4a
·richart on Nov 11 2019, 16:03.

Oct 28 2019

Make akantu compile again on ubuntu xenial
7d5788cb11eb
·richart on Oct 28 2019, 21:24.

Oct 10 2019

examples changed in phasefield
adce8c7a3b54
·pundir on Oct 10 2019, 13:37.

Oct 5 2019

conflicts with master resolved
cc6eaaa2c72e
·pundir on Oct 5 2019, 23:06.

Oct 4 2019

onElementAdded only for elements of the correct dimension
850e6e7cab7d
·richart on Oct 4 2019, 17:09.
Moving the flipFacet call to the mesh facet creation code
9ced33b21085
·richart on Oct 4 2019, 16:50.
Tangent matrix re-computation a bit more clever
cabfaf40d130
·richart on Oct 4 2019, 15:57.

Aug 20 2019

bug fix in the profil construction
d9813e44eab2
·richart on Aug 20 2019, 16:21.
Removing useless function + bug fix
4cc5593bbcc3
·richart on Aug 20 2019, 16:08.

Aug 9 2019

made the getNbDataPerElem more generic
68b36dbdab07
·richart on Aug 9 2019, 19:17.

rAKA/src/modelfeatures/changes-to…2d34133da9888a86bef69e9…

May 14 2021

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rAKA/src/model
features/changes-to…2d34133da9888a86bef69e9…