Diffusion akantu (features/changes-to-address-joss-review) History

rAKA/src/model
features/changes-to…a23d4b76944e22f683cf8d2…

Aug 17 2021

Preparing version 4.0.0
a23d4b76944e
·richart on Aug 17 2021, 18:15.

Aug 3 2021

Merge branch 'bugfixes/boundary_changes_in_solver' into 'master'
020d57e328cd
·richart on Aug 3 2021, 12:24.

Jul 28 2021

Code quality corrections
67d8f5cfd95f
·richart on Jul 28 2021, 22:59.
Correction based on @ganciaux review
c8d9385f5ff2
·richart on Jul 28 2021, 14:06.
Resetting the J matrix if the boundary changed
6262bb9b0011
·branch: bugfixes/boundary_changes_in_solver
·richart on Jul 28 2021, 11:17.

Jul 20 2021

Merge branch 'master' into features/contact
251af691556a
·richart on Jul 20 2021, 18:23.

Jun 30 2021

Merge branch 'features/material-selector-python' into 'master'
92bb4e260b29
·anciaux on Jun 30 2021, 15:02.

Jun 26 2021

Bug fix following factorization
7d0cc3b36cbd
·richart on Jun 26 2021, 13:56.

Jun 25 2021

Missing symbols with clang
88e4bdd1fc1d
·richart on Jun 25 2021, 11:10.

Jun 24 2021

Corrected clang compilation error and linted some part of the contact code
40104a165ba1
·richart on Jun 24 2021, 22:37.
Correction based on remarks on MR !9
2985136e8a09
·richart on Jun 24 2021, 14:12.
Bug fix from the previous refactoring
13da75edd185
·richart on Jun 24 2021, 14:00.
Merge branch 'master' into features/contact
80a7ec7d8c7d
·richart on Jun 24 2021, 12:18.

Jun 23 2021

refactoring the code of the coupler solid contact
b75e7eac6591
·richart on Jun 23 2021, 22:23.

Jun 19 2021

changes the dof manage for coupler solid cohesive contact
d4516410c368
·Mohit Pundir on Jun 19 2021, 21:54.

Jun 15 2021

indentation
74430aec0412
·anciaux on Jun 15 2021, 14:18.
remove useless coefficient
1c47c504ad49
·anciaux on Jun 15 2021, 12:15.

Jun 9 2021

Compilation fixes following application of suggestions
157e744011a6
·richart on Jun 9 2021, 14:18.

Jun 8 2021

Apply 34 suggestion(s) to 15 file(s)
b963975cba79
·richart / tomohitpundir on Jun 8 2021, 17:35.
Merge branch 'master' into features/contact
bacf19476747
·richart on Jun 8 2021, 11:08.

Jun 6 2021

tests/examples and python modules for contact code added
205db61909bc
·pundir on Jun 6 2021, 01:17.

May 28 2021

Bug fix in cohesive element inseration while PBC are active
5d6969fe38af
·richart / gallyamov on May 28 2021, 11:35.

May 26 2021

Improved material-selector
2d69ce3355d2
·richart on May 26 2021, 16:27.

May 14 2021

Merge branch 'master' into features/phasefield
45efedd36c79
·richart on May 14 2021, 11:23.
Merge branch 'master' into features/phasefield
48566fff3ed0
·branch: features/phasefield
·richart on May 14 2021, 11:23.
Correcting documentation
2d34133da988
·richart on May 14 2021, 11:18.
Correcting documentation
fdaa2dacbd0c
·richart on May 14 2021, 11:18.
Linting the code and applying clang-tidy corrections
a52b94276329
·richart on May 14 2021, 11:13.
Linting the code and applying clang-tidy corrections
583b06990849
·richart on May 14 2021, 11:13.
Removing useless parameter that comes from a copy/paste...
cc28db023977
·richart on May 14 2021, 11:13.
Removing useless parameter that comes from a copy/paste...
ed63cd404c2f
·richart on May 14 2021, 11:13.
Reordering methods
7b8c44876f35
·richart on May 14 2021, 10:29.
Reordering methods
a1f8c50c9afc
·richart on May 14 2021, 10:29.

Apr 29 2021

Merge branch 'features/doc_energies' into 'master'
38002f187447
·richart on Apr 29 2021, 16:54.
Merge branch 'features/doc_energies' into 'master'
ca7a0f4b9298
·richart on Apr 29 2021, 16:54.

Apr 28 2021

fixed override functions
11b13960905f
·pundir on Apr 28 2021, 13:06.
fixed override functions
a3a0c621fd12
·pundir on Apr 28 2021, 13:06.

Apr 7 2021

removing memory part for contact mechanics and coupler classes
e1527e69fc3c
·pundir on Apr 7 2021, 12:16.
Merge branch 'master' of gitlab.com:akantu/akantu into features/contact
b310023952d2
·pundir on Apr 7 2021, 10:14.

Apr 2 2021

removed the memory part from the phasefield model
a4358f0535b7
·pundir on Apr 2 2021, 08:56.
removed the memory part from the phasefield model
2f318e8d0e9b
·pundir on Apr 2 2021, 08:56.
Merge branch 'master' into features/phasefield
00d14211d024
·pundir on Apr 2 2021, 01:37.
Merge branch 'master' into features/phasefield
5acfa6ca970d
·pundir on Apr 2 2021, 01:37.
added eta parameter to avoid full degradation of elastic energy
34d21a7b59df
·pundir on Apr 2 2021, 01:28.
added eta parameter to avoid full degradation of elastic energy
be0ea515f119
·pundir on Apr 2 2021, 01:28.
cleaning the code and adding descriptions to the classes
9d9fd80295fa
·pundir on Apr 2 2021, 01:27.
cleaning the code and adding descriptions to the classes
1ce2f1aeb5ef
·pundir on Apr 2 2021, 01:27.

Mar 29 2021

[doc] added energy explaination for plastic materials
10c849b800ee
·frerot on Mar 29 2021, 17:26.
[doc] added energy explaination for plastic materials
5dbea3e35321
·frerot on Mar 29 2021, 17:26.
[doc] added documentation on getEnergy
a355669be2d4
·frerot on Mar 29 2021, 17:10.
[doc] added documentation on getEnergy
e0ac8fcc77c8
·frerot on Mar 29 2021, 17:10.
give better default to the fragmentation_manager tools
8a42a425df9d
·anciaux on Mar 29 2021, 12:24.
give better default to the fragmentation_manager tools
2c2ac9d01138
·anciaux on Mar 29 2021, 12:24.

Mar 16 2021

Merge branch 'features/material_internals_memory' into 'master'
e1a94b307393
·richart on Mar 16 2021, 15:24.
Merge branch 'features/material_internals_memory' into 'master'
ba9e2713a380
·richart on Mar 16 2021, 15:24.

Mar 15 2021

adding a reference to remove a bug visible with pre-strained materials
e7a551f32e9a
·anciaux on Mar 15 2021, 21:50.
adding a reference to remove a bug visible with pre-strained materials
cfebf6035747
·branch: bugfixes/eigen_strain_failed_init
·anciaux on Mar 15 2021, 21:50.
make the compute boundary loads compile and run in structural mechanics
48cd41bb1b6d
·richart on Mar 15 2021, 20:54.
make the compute boundary loads compile and run in structural mechanics
e451f9f2d87d
·richart on Mar 15 2021, 20:54.
silenced override warnings on HeatTransferModel dump() overloads
d1204ff2107e
·frerot on Mar 15 2021, 15:11.
silenced override warnings on HeatTransferModel dump() overloads
64df19a129e0
·frerot on Mar 15 2021, 15:11.

Mar 13 2021

Fixing dumper warnings
9d302f1bae82
·richart on Mar 13 2021, 23:38.
Fixing dumper warnings
d7eb0b0c18be
·richart on Mar 13 2021, 23:38.
Adapting due to changes in structural mechanics
64cf152a54e1
·richart on Mar 13 2021, 19:14.
Adapting due to changes in structural mechanics
95d0dced15d1
·richart on Mar 13 2021, 19:14.
Merge branch 'master' into features/material_internals_memory
bc650421eb69
·richart on Mar 13 2021, 15:31.
Merge branch 'master' into features/material_internals_memory
9cb01e0c3a12
·richart on Mar 13 2021, 15:31.
Merge branch 'master' into features/material_internals_memory
526b254b52f6
·richart on Mar 13 2021, 14:42.
Merge branch 'master' into features/material_internals_memory
12c0a090caee
·richart on Mar 13 2021, 14:42.

Mar 12 2021

Missing include
dc620ac87a26
·richart on Mar 12 2021, 23:24.
Missing include
af769218ef0b
·richart on Mar 12 2021, 23:24.
Merge branch 'master' into bugfixes/dynamics_structural_mechnanics
fcf9aaa26120
·richart on Mar 12 2021, 23:01.
Merge branch 'master' into bugfixes/dynamics_structural_mechnanics
3d1bde8e1dbb
·richart on Mar 12 2021, 23:01.

Mar 11 2021

Bug fix and refactoring
42afd1028858
·richart on Mar 11 2021, 23:40.
Bug fix and refactoring
1159730b10be
·richart on Mar 11 2021, 23:40.

Mar 10 2021

Reactivating the default values for arrays in models
91a164c86eca
·richart on Mar 10 2021, 18:37.
Reactivating the default values for arrays in models
d14823276f56
·richart on Mar 10 2021, 18:37.
Moving code around
c66842af1879
·richart on Mar 10 2021, 09:25.
Moving code around
45d7eb9f8b4a
·richart on Mar 10 2021, 09:25.
Fix element acces via getElementIterable
b40ed4c089ac
·tdroch / richart on Mar 10 2021, 09:10.
Fix element acces via getElementIterable
74402b5c3648
·tdroch / richart on Mar 10 2021, 09:10.
Adding energy computation per element group
f672a1a401c6
·richart on Mar 10 2021, 09:10.
Adding energy computation per element group
6f03fe32926e
·richart on Mar 10 2021, 09:10.
Getting rid of the static memory
a724d3f2390c
·richart on Mar 10 2021, 00:01.
Getting rid of the static memory
33327d9f46e4
·richart on Mar 10 2021, 00:01.

Mar 8 2021

Removed a debug output.
b39b7fc9da15
·Philip Mueller, HS on Mar 8 2021, 17:15.
Removed a debug output.
aeea5e3d8d04
·Philip Mueller, HS on Mar 8 2021, 17:15.

Mar 6 2021

Adding energy computations
ed955d571096
·richart on Mar 6 2021, 19:30.
Adding energy computations
8b2393966ca6
·richart on Mar 6 2021, 19:30.

Mar 4 2021

Adding capability to register materials by name
5443fca997a8
·richart on Mar 4 2021, 13:50.
Adding capability to register materials by name
23a4eb17ac12
·richart on Mar 4 2021, 13:50.

Mar 3 2021

Bug Fixed : ill-Conditioning of stiffness matrix corrected
006b83c5ba82
·pundir on Mar 3 2021, 01:09.
Bug Fixed : ill-Conditioning of stiffness matrix corrected
47d819040865
·pundir on Mar 3 2021, 01:09.

Mar 2 2021

added python interface for defining new user-defined solvers
212fe077251d
·pundir on Mar 2 2021, 01:05.
added python interface for defining new user-defined solvers
e64b992bfcc9
·pundir on Mar 2 2021, 01:05.

Mar 1 2021

functionality to defined solver type for solid model during coupling
5842df242385
·pundir on Mar 1 2021, 17:43.
functionality to defined solver type for solid model during coupling
368683505b73
·pundir on Mar 1 2021, 17:43.

Feb 28 2021

Bug Fixed : internalforces should be zeored and not cleared
285963f471a9
·pundir on Feb 28 2021, 15:32.
Bug Fixed : internalforces should be zeored and not cleared
ac4ae375df6f
·pundir on Feb 28 2021, 15:32.

Feb 26 2021

update material phasefield override functions
7aa518d0af84
·pundir on Feb 26 2021, 22:33.