Diffusion akantu (features/solver-rewrite) History

solver-rewrite

Oct 22 2024

cleaning code for petsc nls
b0fd345654b6
·anciaux on Oct 22 2024, 16:54.
working petsc nls
19ae456df4ad
·anciaux on Oct 22 2024, 16:34.
alow to restore solution state in model for petsc nls
f13c2d844057
·anciaux on Oct 22 2024, 16:33.
modernize code to c++-17
f9194dc804a0
·anciaux on Oct 22 2024, 16:32.

Oct 21 2024

still try to debug the nsl solver
6f86cbde5caf
·anciaux on Oct 21 2024, 13:36.

Oct 20 2024

c++ 17 style
b25081088911
·anciaux on Oct 20 2024, 22:47.
remove the useless callback and rearrange nls
c2e0e6c172ab
·anciaux on Oct 20 2024, 22:46.

Oct 19 2024

comment for understanding
9d9423aa4498
·anciaux on Oct 19 2024, 12:02.
start testing the petsc SNES
b7f170e9a1a4
·anciaux on Oct 19 2024, 09:31.

Oct 16 2024

auto range loop c++-17
17349552d7a6
·anciaux on Oct 16 2024, 12:22.

Oct 15 2024

c++ range loop
d82f7ebeaf2a
·anciaux on Oct 15 2024, 16:20.
allows solver_options in initFull
ad98b01677a5
·anciaux on Oct 15 2024, 16:17.

Oct 11 2024

do not pass blocked dofs when solving the lumped system: unnecessary
9844e2ad92ca
·anciaux on Oct 11 2024, 17:32.
renaming back to SolverVector
d2a7181e2483
·anciaux on Oct 11 2024, 16:58.
use the scaling for solving lumped with petsc
612a9b697cb5
·anciaux on Oct 11 2024, 11:18.
enable solvervector resize and update of petsc IS from dofmanager
d5ce859b3064
·anciaux on Oct 11 2024, 07:20.
remove useless member of dofdata
3231c47bc0e8
·anciaux on Oct 11 2024, 07:20.
line formating
a8d44609d546
·anciaux on Oct 11 2024, 07:19.

Oct 8 2024

working solverlumped with petsc dof_manager
4603364dc65f
·anciaux on Oct 8 2024, 18:24.

Oct 5 2024

adding a version safer but with a copy
70dc17ecaa1b
·anciaux on Oct 5 2024, 23:05.
prevent petsc to finalize mpi (as mpi4py may have done it already)
c0db265d35d8
·anciaux on Oct 5 2024, 16:36.
cleaning
c5d3e654a5d8
·anciaux on Oct 5 2024, 11:52.

Oct 4 2024

cleaning
237f49d247c0
·anciaux on Oct 4 2024, 17:33.
error handler for PETSc generates nice Akantu exceptions
63e3229da822
·anciaux on Oct 4 2024, 15:41.

Oct 2 2024

set default solver in model options
ab7c9d7adaae
·anciaux on Oct 2 2024, 18:28.
set package
5cfc6d90c229
·anciaux on Oct 2 2024, 16:51.
protect mumps for compilation
9eef1190ce9f
·anciaux on Oct 2 2024, 16:46.

Oct 1 2024

protect code for when petsc not activated
434e4d6658b8
·anciaux on Oct 1 2024, 23:55.
fix bug at destruction of dof_manager
fd93c90db44f
·anciaux on Oct 1 2024, 22:36.
fix petsc for lumped solver type
4973754bc60a
·anciaux on Oct 1 2024, 22:08.

Sep 26 2024

new set func for parameters: std::any
e1c6b4798fa2
·anciaux on Sep 26 2024, 17:50.

Sep 25 2024

broken
fa11b9853369
·anciaux on Sep 25 2024, 13:24.
cleaning stdout messages
dde89acc6be6
·anciaux on Sep 25 2024, 08:03.
unregister dofmanager from mesh: allow multiple dofmanager creation
01c8bcfe7428
·anciaux on Sep 25 2024, 07:48.
fixing dofmanagerpetsc instantiation
0cd787eb1bf6
·anciaux on Sep 25 2024, 07:48.

Sep 23 2024

transition to use akantu newton raphson with petsc
6173df8a4138
·anciaux on Sep 23 2024, 17:08.

Jun 6 2024

reshape parameters for petsc solvers
ad61a98e3084
·anciaux on Jun 6 2024, 19:18.

Jun 5 2024

adding option to use petsc solver
bfbfc54a0eaa
·anciaux on Jun 5 2024, 19:36.

May 24 2024

add the possibility to choose the sparse solver
25f8fa979320
·anciaux on May 24 2024, 08:55.

May 21 2024

typo
a919841507b2
·anciaux on May 21 2024, 17:02.
sparse solver petsc with a test (in sequential so far)
c41f39389c1c
·anciaux on May 21 2024, 14:19.

May 17 2024

fix application of blocked dofs
6eafdcc51f68
·anciaux on May 17 2024, 08:57.

Feb 27 2024

fix compilation issues
bb626ad52752
·anciaux on Feb 27 2024, 11:30.
Merge branch 'master' into features/solver-rewrite
9c7d441921d8
·anciaux on Feb 27 2024, 09:54.
Merge branch 'master' into features/solver-rewrite
e0d3caf99a5b
·anciaux on Feb 27 2024, 09:48.

Dec 13 2023

Adding CI on macos
5d2ca6c2706c
·richart / anciaux on Dec 13 2023, 15:50.

Dec 12 2023

modify tests
9a9c100c6b8a
·anciaux on Dec 12 2023, 14:02.
Improving the documentation according to the JOSS review
571699bcd9af
·richart on Dec 12 2023, 08:47.
renaming sparse solver and ready for questions
67a40dcbc411
·anciaux on Dec 12 2023, 06:32.

Dec 8 2023

nonlinearsolver: regroup newtonraphson and linear
67ee3c8f5e95
·anciaux on Dec 8 2023, 15:50.

Nov 30 2023

blocked dofs to dof_manager and mother class dof_manager in solvers
5b6580801b90
·anciaux on Nov 30 2023, 09:43.

Nov 23 2023

A not initialized in material_cohesive
9f4afd25dd16
·richart on Nov 23 2023, 19:13.
Bug fix in the assembly of stiffness matrix for cohesive elements
e3dd893dace5
·richart on Nov 23 2023, 19:10.

Sep 28 2023

More dumper aliases
f45a61a0abfe
·richart on Sep 28 2023, 21:54.
Merge branch 'features/changes-to-address-joss-review' of gitlab.com…
96c4bcb7ed57
·richart on Sep 28 2023, 20:03.
Adding aliasses names for dumpers
8524c2299432
·richart on Sep 28 2023, 20:02.
fix conflict
34e4ba79a439
·saduruss on Sep 28 2023, 16:31.
phase-field c++ example
58cff193772f
·saduruss on Sep 28 2023, 16:29.
Correcting nammings and compilation error
bef9a046a233
·richart on Sep 28 2023, 15:59.

Sep 27 2023

Merge remote-tracking branch 'origin/master' into features/changes-to-address…
d6dc8dd6c426
·richart on Sep 27 2023, 17:01.

Sep 14 2023

Missing changes in damage non local
73d9497cc7ba
·richart on Sep 14 2023, 21:56.
Bug fix in the constructor order
d96fd9e6de8f
·richart on Sep 14 2023, 20:39.
Switching to shared_ptr to correct undefined behaviors in the the python…
7cf2965a2846
·richart on Sep 14 2023, 19:25.

Sep 13 2023

Missing python interfaces [still a bug with internals in python]
67530890544a
·richart on Sep 13 2023, 20:35.

Sep 12 2023

Bug fix in the coupler interface
c8e866554c97
·richart on Sep 12 2023, 13:21.
Merge branch 'master' into features/make_multiple_materials_independant_solid_m…
254edd750e3a
·richart on Sep 12 2023, 09:01.

Sep 8 2023

Correcting problems with math_jax3 plus minor fixes
f26c9b7daf8b
·richart / Nicolas Richart on Sep 8 2023, 09:31.

Sep 6 2023

More bug introduced during Eigenification
4d8f88a27aa2
·branch: bugfixes/contact_mechanics_model
·Nicolas Richart on Sep 6 2023, 01:02.

Sep 4 2023

Transpose wrongly placed
4abeadecb292
·Nicolas Richart on Sep 4 2023, 16:15.
Exanding coupler interface
d8a7c9ab4052
·Nicolas Richart on Sep 4 2023, 15:51.

Aug 2 2023

Merge branch 'master' into features/make_multiple_materials_independant_solid_m…
5b14b292ffd6
·Nicolas Richart on Aug 2 2023, 12:25.

Aug 1 2023

Bug fixes cohesive elements
fb1f70bc20e0
·Nicolas Richart on Aug 1 2023, 23:17.

Jul 28 2023

Fixing bugs and adding missing python interface
0b5b06918b93
·Nicolas Richart on Jul 28 2023, 16:59.

Jul 25 2023

Moving heat transfer to diffusion model
4ad6a31e0a1a
·Nicolas Richart on Jul 25 2023, 16:35.

Jul 21 2023

[wip] Solved compilation issues
a91fc673e8e7
·Nicolas Richart on Jul 21 2023, 11:23.

Jul 20 2023

Adding missing python interface and linting
3ef774152252
·Nicolas Richart on Jul 20 2023, 21:49.
Fixing buges and reverting on registerInternal
cd4ab7137869
·Nicolas Richart on Jul 20 2023, 17:23.

Jul 14 2023

[wip] Reaching a compiling point need to debug now
378e70d38150
·Nicolas Richart on Jul 14 2023, 11:37.

May 5 2023

Merge branch 'bugfixes/all_bugs_found_by_working_on_tutorials' into 'master'
882b8698ac6c
·anciaux on May 5 2023, 12:15.

May 4 2023

Wrong dimension used
9815bf3c7ce6
·richart on May 4 2023, 22:36.
code formatting
ea41a8601b8b
·branch: bugfixes/60-hybrid-phase-field-formulation-unstable-in-dynamics
·saduruss on May 4 2023, 09:39.

May 3 2023

add phase-field isotropic option
cadd5fc53f8b
·saduruss on May 3 2023, 17:44.

May 1 2023

Minor changes in Marigo for dumpers
d64336973823
·richart on May 1 2023, 01:04.
Bug fix in applyBC
210052b6de93
·richart on May 1 2023, 01:02.

Apr 26 2023

Const correctness messed up in the Array
58cda29883ee
·richart on Apr 26 2023, 22:37.

Apr 21 2023

Cleaning debug messages
3d0478aea235
·branch: bugfixes/57-print-statement-in-fragment-manager
·richart on Apr 21 2023, 09:20.

Apr 13 2023

[wip] Changing more internalfields to shared_ptr
843d4082f874
·Nicolas Richart on Apr 13 2023, 00:51.

Apr 11 2023

Merge remote-tracking branch 'origin/master' into…
49129e76fff7
·Nicolas Richart on Apr 11 2023, 22:22.
[wip] changing internal fields to std::shared_ptr [ci.skip]
68a3bb87fbbb
·Nicolas Richart on Apr 11 2023, 08:48.

Apr 4 2023

Warning correction and a python example
d723f97de42a
·gallyamov on Apr 4 2023, 14:16.

Mar 31 2023

Releasing version 5.0.0
782eefab8ea8
·richart on Mar 31 2023, 11:26.

Mar 20 2023

fixes for code quality
1eba87747331
·branch: features/38-damage-energy-computation-missing-in-phasefield-model
·saduruss on Mar 20 2023, 11:32.

Mar 16 2023

fixes for compatibility with Eigen
ccb07ef1e422
·saduruss on Mar 16 2023, 17:35.

Mar 15 2023

solve conflicts with master
5bb957e9b427
·saduruss on Mar 15 2023, 17:13.

Mar 13 2023

fix in damage energy density
73c5b59569fb
·saduruss on Mar 13 2023, 15:19.
delete dead code, move unwanted getters to private, put element filter in src
e46872a2555d
·saduruss on Mar 13 2023, 15:03.

Mar 7 2023

Removing the material list generator
adcfbd6d923f
·Nicolas Richart on Mar 7 2023, 14:12.
[wip] Making the branch compile after a rebase [ci.skip]
5c7ea5a6ccda
·Nicolas Richart on Mar 7 2023, 10:42.

Mar 3 2023

Unizialized memory in phase field material
61931e8adefa
·Nicolas Richart on Mar 3 2023, 16:53.

Mar 1 2023

Merge remote-tracking branch 'origin/master' into features/eigen
5a6abff5d24e
·Nicolas Richart on Mar 1 2023, 13:51.

rAKA/src/modelfeatures/solver-rewrite

Oct 22 2024

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rAKA/src/model
features/solver-rewrite