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Jan 6 2020
Jan 6 2020
boubat committed R5105:c89175a1a53a: switch back to dev parameters (equal to cancelling the former commit). (authored by boubat).
switch back to dev parameters (equal to cancelling the former commit).
boubat committed R5105:bb2433ef5bda: export meta data from segmentScapula, findScapulaLandmarksSCase, and… (authored by boubat).
export meta data from segmentScapula, findScapulaLandmarksSCase, and…
small updates
Dec 20 2019
Dec 20 2019
boubat committed R8218:d19a22d656dc: measureScase now auto computes the RC muscles degenration, and exports meta… (authored by boubat).
measureScase now auto computes the RC muscles degenration, and exports meta…
Nov 11 2019
Nov 11 2019
boubat committed R4970:0680d19b2b5a: Changes some variables names in MSM_simmulation.m for better readability. (authored by boubat).
Changes some variables names in MSM_simmulation.m for better readability.
Nov 8 2019
Nov 8 2019
boubat committed R4970:256dc930ab2b: Adds the export of the positions of the GH center and the arm's bones' centers… (authored by boubat).
Adds the export of the positions of the GH center and the arm's bones' centers…
Nov 1 2019
Nov 1 2019
boubat committed R4970:285cd1841e94: Modifies MSM_simulation()'s arguments handling. (authored by boubat).
Modifies MSM_simulation()'s arguments handling.
Oct 30 2019
Oct 30 2019
boubat committed R4970:b8734853a5b1: Adds the documentation. Fixes some scripts. (authored by boubat).
Adds the documentation. Fixes some scripts.
Oct 28 2019
Oct 28 2019
boubat committed R4970:7da737984956: Modifies the reversed model to work with MSM_simulation. Documentation in… (authored by boubat).
Modifies the reversed model to work with MSM_simulation. Documentation in…
Oct 23 2019
Oct 23 2019
boubat committed R4970:d633cae95644: Adds the function MSM_simulation to run a whole simulation based on parameters… (authored by boubat).
Adds the function MSM_simulation to run a whole simulation based on parameters…
boubat committed R4970:724d421f61bd: Adds the storage of more parameters in the saved variables for the anatomical… (authored by boubat).
Adds the storage of more parameters in the saved variables for the anatomical…
Oct 15 2019
Oct 15 2019
boubat committed R4970:04d2c6542252: Adds the storage of more parameters in the saved variables. Reversed model only… (authored by boubat).
Adds the storage of more parameters in the saved variables. Reversed model only…
boubat committed R4970:85cd9ffecf3f: Adds the possibility to hide one or more bones in the visualisations. This is… (authored by boubat).
Adds the possibility to hide one or more bones in the visualisations. This is…
20191007_2008_resimulation environment.
boubat committed R4970:6b280744db23: Sets lam_u and lam_l fitting 2008 simulations. (authored by boubat).
Sets lam_u and lam_l fitting 2008 simulations.
boubat committed R4970:68c0185c087c: Adds muscles wrapping correction for the anatomical model. (authored by boubat).
Adds muscles wrapping correction for the anatomical model.
boubat committed R4970:bba07bede41b: Same as fbc01a9 but for the anatomical model (i.e the model now takes into… (authored by boubat).
Same as fbc01a9 but for the anatomical model (i.e the model now takes into…
boubat committed R4970:18b05bec3821: sets values of lam_u and lam_l that are more consistent with the EMG… (authored by boubat).
sets values of lam_u and lam_l that are more consistent with the EMG…
boubat committed R4970:5aca3f3b308e: Adds the SSDATA variable to the saved variables (in order to be able to plot… (authored by boubat).
Adds the SSDATA variable to the saved variables (in order to be able to plot…
boubat committed R4970:2101c6083df5: Fixes the muscle wrapping issue manually (instead of copy-pasting the Ehsan… (authored by boubat).
Fixes the muscle wrapping issue manually (instead of copy-pasting the Ehsan…
boubat committed R4970:fbc01a93492f: Now takes into account the number of segments per muscle to set the segments'… (authored by boubat).
Now takes into account the number of segments per muscle to set the segments'…
Aug 27 2019
Aug 27 2019
boubat committed R5105:da14d7ebd36c: Allows readDicomStack to continue. segmentScapula will log an error in 'Load… (authored by boubat).
Allows readDicomStack to continue. segmentScapula will log an error in 'Load…
Fixes previous commit.
boubat committed R5105:bdf09517e71c: Modified the handling of segmentScapula's arguments. New arguments available. (authored by boubat).
Modified the handling of segmentScapula's arguments. New arguments available.
File added for review and maintenance.
Erase test displays.
boubat committed R5105:01b7952df4bc: Complete 'WARNING' about shell. Add tests. (authored by boubat).
Complete 'WARNING' about shell. Add tests.
boubat committed R5105:a7895c633b2e: Fix the reference to a nonexistent variable. (authored by boubat).
Fix the reference to a nonexistent variable.
Small correction in README.md.
Aug 22 2019
Aug 22 2019
boubat committed R8218:24267f0a0d88: The catch now return a correct outputArg to detect that DICOM files couldn't be… (authored by boubat).
The catch now return a correct outputArg to detect that DICOM files couldn't be…
Aug 14 2019
Aug 14 2019
Add warning about used shell
Aug 13 2019
Aug 13 2019
boubat committed R5105:8222343c77d4: Last modifications found in lbovenus added. The commit of these… (authored by boubat).
Last modifications found in lbovenus added. The commit of these…
Aug 9 2019
Aug 9 2019
boubat committed R8218:81c136978cc4: Modification in arguments handling by measureSCase. rawFromExcel changed back… (authored by boubat).
Modification in arguments handling by measureSCase. rawFromExcel changed back…
Aug 8 2019
Aug 8 2019
boubat committed R8218:2ede99566008: Fixed and modified according to A.Terrier comments (authored by boubat).
Fixed and modified according to A.Terrier comments
Jul 31 2019
Jul 31 2019
boubat committed R8218:896b29123d60: fopen() error 'fixed'. (No, apparently you can't fopen a file already opened in… (authored by boubat).
fopen() error 'fixed'. (No, apparently you can't fopen a file already opened in…
boubat committed R8218:48fb99446bf3: Add whole database saving, upgrade measureSCase arguments verification, update… (authored by boubat).
Add whole database saving, upgrade measureSCase arguments verification, update…
update logfile writing.
Jul 30 2019
Jul 30 2019
Filename changed back to 'anatomy.csv'
boubat committed R8218:8663a605763c: Some fixes and documentation. Ready to be merged. (authored by boubat).
Some fixes and documentation. Ready to be merged.
boubat committed R8218:2edbc5ad5089: ShoulderCase.saveCSV becomes ShoulderCase.appendToCSV and have to be given a… (authored by boubat).
ShoulderCase.saveCSV becomes ShoulderCase.appendToCSV and have to be given a…
boubat committed R8218:b75dd8c49177: rawFromExcel can now be called on a linux system (e.g lbovenus.epfl.ch). Little… (authored by boubat).
rawFromExcel can now be called on a linux system (e.g lbovenus.epfl.ch). Little…
listSCase fixed and commented
small updates
Revert "small updates"
boubat added a reverting change for R8218:abcd19405ed2: small updates: R8218:be8ed18438e7: Revert "small updates".
small updates
Jul 29 2019
Jul 29 2019
small correction in ShoulderCase.saveCSV
Add file closing in ShoulderCase.saveCSV
boubat committed R8218:c3f112e6da73: implementation of ShoulderCase.saveCSV method (authored by boubat).
implementation of ShoulderCase.saveCSV method
boubat committed R8218:6584e4c2320b: Add more detailed error message and the check for updateCalculations condition (authored by boubat).
Add more detailed error message and the check for updateCalculations condition
boubat committed R8218:f518514550ef: Add a few comments and delete the former code (authored by boubat).
Add a few comments and delete the former code
boubat committed R8218:7a04e1267d56: Revert "The arguments available for measureSCase are now… (authored by boubat).
Revert "The arguments available for measureSCase are now…
boubat committed R8218:3ff6ec64c458: The arguments available for measureSCase are now: 'UpdateGlenoidDensity'… (authored by boubat).
The arguments available for measureSCase are now: 'UpdateGlenoidDensity'…
boubat committed R8218:c48d5c726896: The arguments available for measureSCase are now: 'UpdateGlenoidDensity'… (authored by boubat).
The arguments available for measureSCase are now: 'UpdateGlenoidDensity'…
add details about SCase errors
Erase redundant condition
Initialisation. Add config file
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