lammps/docmaster
lammps/doc
master
History Graph
History Graph
Commit | Author | Details | Committed | |||
---|---|---|---|---|---|---|
4a90bca7a3b4 | Steve Plimpton | patch 17Mar17 | Mar 17 2017 | |||
fcc3b3bd365d | sjplimp/GitHub | Merge pull request #421 from akohlmey/memory-output | Mar 17 2017 | |||
53a3877c3d3e | sjplimp/GitHub | Merge pull request #420 from rbberger/doc_anchor_check | Mar 17 2017 | |||
621d7d5ce0f2 | Richard Berger | Correct off-by-one error in line number reported | Mar 17 2017 | |||
1bb9c7da42e5 | Richard Berger | Remove some duplicate anchors in documentation | Mar 17 2017 | |||
f893104b18d1 | Richard Berger | Add anchor_check to doc Makefile | Mar 17 2017 | |||
efb2a942e046 | Richard Berger | Add utility to detect duplicate anchors in documentation files | Mar 17 2017 | |||
070ce33a13df | Axel Kohlmeyer | improve memory usage reporting in info and output class | Mar 16 2017 | |||
f604f86cfcd4 | Axel Kohlmeyer | add fix filter/corotate to some administrative files | Mar 16 2017 | |||
0d8f74f0c52e | Axel Kohlmeyer | Merge branch 'filter_corotate' of https://github.com/lukin17/lammps into pull… | Mar 15 2017 | |||
3a2da51a8210 | sjplimp/GitHub | Merge pull request #413 from ohenrich/user-cgdna | Mar 15 2017 | |||
b1c59126f750 | sjplimp/GitHub | Merge pull request #415 from stanmoore1/kk_qeq | Mar 15 2017 | |||
4c77838514d1 | sjplimp/GitHub | Merge pull request #414 from sstrong99/flow-gauss-doc-addition | Mar 15 2017 | |||
c3ce3747e049 | lukin17 | Added fix filter/corotate. | Mar 15 2017 | |||
fdc390ad0548 | Stan Moore | Tweaking docs for Kokkos package | Mar 14 2017 | |||
580f6b567b12 | Stan Moore | Add neigh/qeq option to Kokkos | Mar 14 2017 | |||
27b1c33a1680 | Steven Strong | updated the NEMD discussion in the how-to documentation about flow/gauss | Mar 14 2017 | |||
7a75cd111c3d | Oliver Henrich | Minor updates in documentation and setup tool, merge before upgrade to oxDNA2 | Mar 14 2017 | |||
23b828793333 | Oliver Henrich | Updated documentation and simple setup tool | Mar 14 2017 | |||
4cfe623bc17d | Tim Mattox | Correct a typo in the fix_halt.txt documentation. | Mar 11 2017 | |||
f871ecdc67db | Steve Plimpton | change to RCB cuts in load-balancing commands, also a new option for fix halt | Mar 10 2017 | |||
f70752c18f8d | Giacomo Fiorin | Include PDF of Colvars doc missing in previous commit | Mar 10 2017 | |||
0b4adaa9e6a1 | Giacomo Fiorin | Backport typo fixes that were not previously pushed to the Colvars repository | Mar 10 2017 | |||
5fe620663813 | Giacomo Fiorin | Update Colvars module to version 2017-03-10 | Mar 10 2017 | |||
79b005dc3d5f | Steve Plimpton | patch 7Mar17 | Mar 7 2017 | |||
920641bbffbc | sjplimp/GitHub | Merge pull request #399 from rbberger/docs_spelling_fixes | Mar 7 2017 | |||
4af6557568e7 | sjplimp/GitHub | Merge pull request #394 from jaapkroe/kolmogorov-crespi | Mar 7 2017 | |||
020e75e7efff | sjplimp/GitHub | Merge pull request #386 from akohlmey/doc-consistentcy | Mar 7 2017 | |||
efaa4c67109f | Steve Plimpton | new neigh_modify exclude option, other SNAP changes | Mar 7 2017 | |||
21be86c42393 | Richard Berger | Fix typos in txt2html | Mar 7 2017 | |||
007f3c66a033 | Richard Berger | Third batch of spelling fixes in manual | Mar 7 2017 | |||
32708860a9fa | Richard Berger | Add remaining false positives | Mar 7 2017 | |||
fc9eebb9367c | Richard Berger | Added spellcheck utility to documentation build | Mar 6 2017 | |||
084d831bce01 | Richard Berger | Second batch of spelling fixes in manual | Mar 6 2017 | |||
fd78486086d9 | Richard Berger | First batch of spelling fixes in manual | Mar 6 2017 | |||
8a0e44db83de | Jaap Kroes | updated documentation and ev_tally | Mar 1 2017 | |||
3ac74a1d6995 | Axel Kohlmeyer | update lammps.book file for latest doc changes | Feb 28 2017 | |||
3605208a45bb | Axel Kohlmeyer | add a few more missing details for integrating pair style kolmogorov/crespi/z | Feb 28 2017 | |||
9b01949cacfc | Axel Kohlmeyer | make the introduction of the command-by-category list less confusing | Feb 28 2017 | |||
323570c92036 | Jaap Kroes | added jpg for kolmogorov-crespi-z equations and fixed hybrid/overlay check in… | Feb 28 2017 | |||
a1b40b902d3e | Jaap Kroes | Added Kolmogorov-Crespi potential | Feb 28 2017 | |||
2708c8683626 | Axel Kohlmeyer | fix typos: moleclue -> molecule | Feb 28 2017 | |||
458b6749e7b6 | Oliver Henrich | Corrected comment in 3' to 5' directionality check. | Feb 22 2017 | |||
20a9ffe69dfd | Axel Kohlmeyer | improve consistency and resolve dead links for USER-CGDNA related doc files | Feb 22 2017 | |||
49e83b434800 | Steve Plimpton | patch 21Feb17 sync with GHub | Feb 22 2017 | |||
b70c670aac56 | sjplimp/GitHub | Merge pull request #383 from stanmoore1/rshan_class2_kk | Feb 21 2017 | |||
429264a12bac | sjplimp/GitHub | Merge pull request #380 from hheenen/core_shell_documentation | Feb 21 2017 | |||
1cd4c48cccdb | Steve Plimpton | new SNAP potential for W | Feb 21 2017 | |||
ccaec315db31 | Stan Moore | Updating docs for Kokkos class2 | Feb 15 2017 | |||
0fb8dacc00f8 | Axel Kohlmeyer/GitHub | one more Finchham to Fincham change | Feb 14 2017 | |||
6b923476b96c | Hendrik Heenen | updated documentation and examples for coreshell | Feb 14 2017 | |||
cb982f2f28ab | Steve Plimpton | sync 13Feb17 patch back to GH | Feb 13 2017 | |||
4843296d4e57 | sjplimp/GitHub | Merge pull request #372 from akohlmey/fft-cleanup | Feb 13 2017 | |||
2bdda8f6c013 | Steve Plimpton | patch 12Feb17 - change int to tagint for compute group/group | Feb 13 2017 | |||
0068ef56168f | Steve Plimpton | added molecule option to compute group/group command | Feb 10 2017 | |||
0efd20948050 | Oliver Henrich | Merge branch 'master' into user-cgdna | Feb 9 2017 | |||
8c074a363ae8 | Axel Kohlmeyer | Merge branch 'master' into small-updates-and-fixes | Feb 8 2017 | |||
191453e1c73d | Axel Kohlmeyer | Merge branch 'master' into fft-cleanup | Feb 3 2017 | |||
6595fde0a18b | Axel Kohlmeyer | explain in more detail the handling of error checking for numerical inputs | Feb 2 2017 | |||
9d1991bf840c | Axel Kohlmeyer | remove support for obsolete legacy FFT libraries and point -DFFT_FFTW to FFTW3 | Feb 2 2017 | |||
0a87b7443a75 | Stefan Paquay | Updated contributing authors and docs | Feb 2 2017 | |||
ed0a347fbf61 | Oliver Henrich | Merge branch 'master' into user-cgdna | Jan 30 2017 | |||
f8506fee23e1 | Steve Plimpton | sync GHub with SVN | Jan 26 2017 | |||
149f37e764dc | Oliver Henrich | Corrected reference to Fig.1 | Jan 26 2017 | |||
caea8973a3ba | Steve Plimpton | add neighbor list kind output to screen | Jan 20 2017 | |||
9a299875dade | Steve Plimpton | simplified neighbor list copying to avoid possible same-timestep re-build issues | Jan 20 2017 | |||
3af4b3c28c8b | sjplimp/GitHub | Merge pull request #337 from ohenrich/user-cgdna | Jan 18 2017 | |||
d2fc88a626e3 | Steve Plimpton | patch 17Jan17 | Jan 17 2017 | |||
c19d2011bb0f | sjplimp/GitHub | Merge pull request #334 from sstrong99/flow_gauss_changeRef | Jan 17 2017 | |||
973bef4d4527 | sjplimp/GitHub | Merge pull request #332 from akohlmey/coord-atom-orientorder-atom-enhancements | Jan 17 2017 | |||
252e07e0838f | sjplimp/GitHub | Merge pull request #330 from akohlmey/collected-small-bugfixes | Jan 17 2017 | |||
d8bc590aaf1f | sjplimp/GitHub | Merge pull request #327 from stanmoore1/kokkos_lib_update | Jan 17 2017 | |||
c9bea60710e6 | sjplimp/GitHub | Merge pull request #326 from Pakketeretet2/github-tutorial-update | Jan 17 2017 | |||
5cd856c97f97 | Steve Plimpton | fix spring doc page update | Jan 17 2017 | |||
98ceb6feb1bf | Axel Kohlmeyer | add missing html files to lammps.book | Jan 14 2017 | |||
374abea0f03f | Axel Kohlmeyer | some minor documentation integration tweaks for USER-CGDNA package | Jan 14 2017 | |||
96259ea2d2bd | Oliver Henrich | Added source code and documentation for USER-CGDNA | Jan 13 2017 | |||
1229f6f60b50 | Steven Strong | Updated the reference for the flow/gauss method, the new reference is much more… | Jan 12 2017 | |||
6950a991624e | Axel Kohlmeyer | Revert "remove obsolete warning about fix rigid image flag restrictions" | Jan 12 2017 | |||
1d0e600ab74b | Axel Kohlmeyer | formatting improvements and small corrections for timer settings and output… | Jan 11 2017 | |||
95706ac846fb | Axel Kohlmeyer | import contributed code for computes coord/atom and orientorder/atom | Jan 10 2017 | |||
0db2a07993b4 | Axel Kohlmeyer | another workaround for duplicate labels (which sphinx does not like) | Jan 9 2017 | |||
33412c76edd7 | Axel Kohlmeyer | correct some formatting issues with USER-NC-DUMP | Jan 9 2017 | |||
e5ac49d1de4b | Axel Kohlmeyer | Merge branch 'master' into collected-small-bugfixes | Jan 9 2017 | |||
c31f1e9f2252 | Steve Plimpton | add fix mscg command, example, lib | Jan 9 2017 | |||
ebd25cc07814 | Stan Moore | Updating docs for Kokkos package | Jan 9 2017 | |||
20f8a8c219a7 | Stefan Paquay | Merge branch 'master' into github-tutorial-update | Jan 9 2017 | |||
51e52b477a51 | Axel Kohlmeyer | remove obsolete warning about fix rigid image flag restrictions | Jan 7 2017 | |||
20a4e365b700 | Axel Kohlmeyer | reduce warning when processing manual with sphinx | Jan 7 2017 | |||
51fa33a407c7 | Steve Plimpton | patch 6Jan17 | Jan 6 2017 | |||
ccd09e39676e | Stefan Paquay | Updated images of succesful merge. | Jan 6 2017 | |||
142770cb2a69 | Steve Plimpton | enable pppm/tip4p to work with triclinic | Jan 6 2017 | |||
3ac58452de6a | sjplimp/GitHub | Merge pull request #310 from EfremBraun/master | Jan 6 2017 | |||
9b348d567bd6 | sjplimp/GitHub | Merge pull request #315 from Pakketeretet2/github-tutorial-update | Jan 6 2017 | |||
41a6a3076e17 | sjplimp/GitHub | Merge pull request #309 from giacomofiorin/colvars-2016-12-22 | Jan 6 2017 | |||
6af56e686d6a | Axel Kohlmeyer | polish the introduction, some more clarifications, corrections and formatting… | Jan 6 2017 | |||
eb1c6a225c1b | Stefan Paquay | typo fixed | Jan 6 2017 | |||
4d0a6d83bdcb | Stefan Paquay | Merged Axel's suggestions and updated text | Jan 6 2017 | |||
958722573f72 | Stefan Paquay | Merge branch 'github-tutorial-update' of https://github. | Jan 6 2017 | |||
9d4667097274 | Stefan Paquay | Updated text and images on reverse pull requests | Jan 6 2017 |
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