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Commit | Author | Details | Committed | ||||
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328860e72934 | fabien | add EquilibriumStagger to unsaturated system | Oct 26 2015 | ||||
19b14f34e6cc | fabien | add EquilibriumConstraints to the unsaturated systems | Oct 26 2015 | ||||
9635e63245f6 | fabien | test: fix transport stagger test for gas species management | Oct 26 2015 | ||||
c61df97b5350 | fabien | impr: variables: doc, gas, chemistry | Oct 26 2015 | ||||
ed266db573ec | fabien | doc : some documentations for transport equations and stagger | Oct 26 2015 | ||||
c9febc252301 | fabien | impr: add VariablesInterface in unsaturated system | Oct 22 2015 | ||||
574c04e43124 | fabien | fix: transport stagger and equations for drying stagger | Oct 21 2015 | ||||
137ca1c0b377 | fabien | fix : fix transport constraints | Oct 21 2015 | ||||
b725b3cc80ed | fabien | fix: fix variables for the drying example | Oct 21 2015 | ||||
0b6746b9ec8d | fabien | example : add drying example for unsaturated system | Oct 21 2015 | ||||
0a01808c94b9 | fabien | feat: add function to obtain scaling factor from a SI unit | Oct 21 2015 | ||||
1d28f469e61d | fabien | Transport stagger for unsaturated system | Oct 14 2015 | ||||
9de2802aad38 | fabien | Aqueous liquid transport equation (unsaturated) | Oct 14 2015 | ||||
0faef04ff3bc | fabien | Gas diffusion equation (unsaturated) | Oct 14 2015 | ||||
e96f9ec8af07 | fabien | Saturation Equation (unsaturated) | Oct 14 2015 | ||||
9f400fef0c2a | fabien | TransportConstraints : constraints for transport equations | Oct 14 2015 | ||||
4e3d1dd452a3 | fabien | Variables for the unsaturated reactive transport system | Oct 14 2015 | ||||
a7c86055496b | fabien | associate numbers with StaggerReturnCode for quick debugguing | Oct 14 2015 | ||||
982e05359269 | fabien | add water viscosity as constants | Oct 14 2015 | ||||
4f607141ce7f | fabien | add helper function to check failure of parabolic solver | Oct 14 2015 | ||||
d577c5f2a2cb | fabien | fix: header guard for src/utils/compat.hpp | Oct 14 2015 | ||||
4119d04a2010 | fabien | test: add tests for physics/laws.hpp | Oct 5 2015 | ||||
284828328b97 | fabien | fix: fix debye-huckel law and tests | Oct 5 2015 | ||||
f50a198281ba | fabien | toolchain: add basic docker image file | Oct 5 2015 | ||||
386ce7bfa07c | fabien | fast: optimize debye-huckel law | Oct 3 2015 | ||||
3c9f0260c8cc | fabien | add new micro-benchmark for AdimensionalSystem | Oct 3 2015 | ||||
cfc694b29259 | fabien | fix: fix FindBenchmark.cmake | Oct 3 2015 | ||||
534fab73249d | fabien | Merge branch 'benchmark' | Oct 1 2015 | ||||
e7c0f3e0f2c8 | fabien | toolchain: micro-benchmark for database container | Oct 1 2015 | ||||
82b1f62aeb2a | fabien | toolchain: add support for micro-benchmarking | Oct 1 2015 | ||||
f71e6ee12d35 | fabien | Merge branch 'specmicp/adim_refactor' | Sep 29 2015 | ||||
8eea5f44bc3c | fabien | refactor: separe residual water in 2 functions | Sep 29 2015 | ||||
bc2979556f46 | fabien | fix: re-compute gas scaling factor | Sep 29 2015 | ||||
fcd797321b23 | fabien | refactor: rename saturation_ -> volume_fraction_ in AdimensionalSystem | Sep 29 2015 | ||||
7da7c3430d33 | fabien | Merge branch 'specmicp/cappressure' | Sep 29 2015 | ||||
4e562635f94b | fabien | refactor: remove AdimensionalSystem header inclusion in solver | Sep 29 2015 | ||||
4f8c2e8a5fc2 | fabien | fix: correct functions for volume fraction gas | Sep 29 2015 | ||||
4bb92b2d2b3f | fabien | feature: add water pressure model in specmicp | Sep 29 2015 | ||||
e1d44a9d9d81 | fabien | impr: padding in adimensional_system_solution | Sep 26 2015 | ||||
24ef8eadfa0f | fabien | refactor: hide default options of AdimensinalSystemOptions | Sep 14 2015 | ||||
f0fd4a5cd0ff | fabien | refactor: adim default options are now in config_*.h file | Sep 14 2015 | ||||
8f3676bf7899 | fabien | refactor: move configuration solution output in config_<> file | Sep 14 2015 | ||||
3fe35fdcbd16 | fabien | output: add comment in solution files of SpecMiCP | Sep 14 2015 | ||||
0d462a7bb38b | fabien | test: add test for specmicp library | Sep 14 2015 | ||||
386114bd5e55 | fabien | test: move cmake rules for specmicp test | Sep 14 2015 | ||||
7465729f8739 | fabien | fix: print the simplified db in specmicp output | Sep 9 2015 | ||||
390c23c8aaee | fabien | fix: correct initialisation of variables in AdimensionalSolver | Sep 9 2015 | ||||
e8d5bb01032b | fabien | fix: correct parsing of a fix fugacity constraint | Sep 9 2015 | ||||
a0d21846cfdb | fabien | database: add more compounds in cemdata | Sep 9 2015 | ||||
db7f20a8c8a1 | fabien | impr: abort solution parsing if metadata are not correct | Aug 11 2015 | ||||
f75db11b41df | fabien | cosmetic: remove old code in comment | Aug 11 2015 | ||||
b9dca64bf78b | fabien | cosmetic: remove comments that show up in the TODO list | Aug 11 2015 | ||||
51f3d18104e9 | fabien | impr: refactor the clean_label function | Aug 11 2015 | ||||
87008f18555b | fabien | impr: use pimpl idiom in transprot stagger | Aug 11 2015 | ||||
33abd27298dd | fabien | test-fix: micpsolver tests must links to the common lib | Aug 11 2015 | ||||
f55d9b72639e | fabien | impr: flag to use chemistry rate in residual computation | Aug 11 2015 | ||||
923b00e74e4f | fabien | fix: logging should now works, | Jul 20 2015 | ||||
1c251fa879ac | fabien | fix: correct assertions in adimensional system numbering | Jul 20 2015 | ||||
5d8f161fb9ba | fabien | fix: Correct saturation index sum | Jul 17 2015 | ||||
d8ef5759bebd | fabien | feat: print saturation index in reactmicp output | Jul 17 2015 | ||||
f41535e29c7c | fabien | refactor: add a header file to configure database | Jul 16 2015 | ||||
79ea7fb9bd4c | fabien | refactor: reactmicp::io::OutputNodalVariables | Jul 15 2015 | ||||
7689fcf7d1fd | fabien | feat: add assert macro to check bounds of species in database | Jul 15 2015 | ||||
cee2d2898673 | fabien | fix: modificator.set_minerals_kinetic | Jul 13 2015 | ||||
5a5d1f0d9096 | fabien | unit api : improve -> pressure converter | Jul 13 2015 | ||||
dfe1eaf99c56 | fabien | database api : improve | Jul 13 2015 | ||||
454602ca96d0 | fabien | impr: add a base class for a class containing the database | Jun 29 2015 | ||||
3ed7f43ef718 | fabien | impr: add functions to find class and properties of aqueous/solid phases | Jun 29 2015 | ||||
8bbfbc127ea9 | fabien | impr: Add errors for every species if label is invalid | Jun 29 2015 | ||||
a9ac384357e6 | fabien | impr: add numerical information about the scalar_t type | Jun 29 2015 | ||||
a6a6c68c7250 | fabien | Add a specmicp binary | Jun 25 2015 | ||||
829fead4677c | fabien | Install SpecMiCP library | Jun 25 2015 | ||||
113dcc715445 | fabien | refact: csv_formatter use the FormatInformation class | Jun 25 2015 | ||||
668f776a2727 | fabien | fix: fix warning du to signed/unsigned comparison | Jun 25 2015 | ||||
321d2e2ffc8c | fabien | feat: add database checking option in specmicp binary | Jun 25 2015 | ||||
5274b7d73936 | fabien | Merge branch 'specmicp_bin' of bitbucket.org:specmicp/specmicp into specmicp_bin | Jun 25 2015 | ||||
866f117c00f6 | fabien | Update test input file of specmicp | Jun 25 2015 | ||||
716c76a4f13f | fabien | feature: Add specmicp binary | Jun 25 2015 | ||||
7d9e3901a22c | fabien | Use the new format class info in output. | Jun 25 2015 | ||||
f42e076c0b54 | fabien | Configure the YAML emitter using the format class. | Jun 25 2015 | ||||
6f5079157492 | fabien | Add formatter information | Jun 25 2015 | ||||
2cfa6e07e379 | fabien | Merge branch 'database' | Jun 25 2015 | ||||
e531335c0c1f | fabien | fix: remove output when checking equation | Jun 25 2015 | ||||
caec039a6266 | fabien | databases: add solid phase formula in cemdata | Jun 25 2015 | ||||
d006aa1ac9f9 | fabien | feat: check formula/equation for compounds, gas and solid phases | Jun 25 2015 | ||||
689c7b7e0ccd | fabien | Do not check composition of benchmark data | Jun 24 2015 | ||||
036ce82ebfe8 | fabien | feat: Check composition (break ABI) | Jun 24 2015 | ||||
b9da1cfa8545 | fabien | Label parser for the element composition | Jun 24 2015 | ||||
8dcafafa6cd7 | fabien | Use the new format class info in output. | Jun 23 2015 | ||||
9c1d4edfaeb5 | fabien | Configure the YAML emitter using the format class. | Jun 23 2015 | ||||
20d72e7ca89b | fabien | Add formatter information | Jun 23 2015 | ||||
7719728b0c10 | fabien | update tests | Jun 22 2015 | ||||
1212aabdfff4 | fabien | Modify signature of AdimensionalSystemSolver constructors | Jun 22 2015 | ||||
84f2ee511d2e | fabien | Remove print statement | Jun 22 2015 | ||||
0a4a5f442443 | fabien | Add a function to print the constraints | Jun 22 2015 | ||||
08252559070d | fabien | Add an option to remove half-cell reaction in configuration | Jun 22 2015 | ||||
a01084ae1afa | fabien | Fix bug in SpecMiCP configuration | Jun 22 2015 | ||||
28fbffc41fa8 | fabien | Do not remove H[+]/HO[-] when dissolving system | Jun 19 2015 | ||||
73f15c1a0b51 | fabien | Merge branch 'master' of bitbucket.org:specmicp/specmicp | Jun 18 2015 | ||||
e9990c0c136f | fabien | Add tests for condition number estimations | Jun 18 2015 |
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