Diffusion SpecMiCP / ReactMiCP (master) History

specmicp/src/reactmicp/systems
masterc5960bb3908819bfb8d7381…

Feb 23 2016

impr:unsaturated scaling of equations
0c267aad86d8
·georget on Feb 23 2016, 05:01.

Feb 22 2016

fix:unsaturated improve unsaturated system
54b4cd1847e6
·georget on Feb 22 2016, 18:46.

Feb 20 2016

feat:unsaturated Add better bcs management
f8005ed71a51
·georget on Feb 20 2016, 16:42.

Feb 12 2016

feat:build add config.h for compilation configuration
c9be56a25d1b
·georget on Feb 12 2016, 19:59.

Feb 9 2016

fix:unsaturated Add virtual destructor in TaskBase of the Transport stagger
5cd777d340f0
·georget on Feb 9 2016, 22:46.
impr:unsaturated check variables after stagger initialization
aaba6845120f
·georget on Feb 9 2016, 15:36.

Feb 7 2016

impr:organization update reactmicp lib like the others
febe8f3e40e1
·georget on Feb 7 2016, 17:08.

Feb 5 2016

impr:unsaturated new safe yaml config for upscaling interface
f4a0766ab4b2
·georget on Feb 5 2016, 19:37.

Feb 4 2016

impr:unsaturated use new safe yaml config to initialize variables
b98b799c5302
·georget on Feb 4 2016, 15:29.
impr:unsaturated add nodes in bcs using vector
18aa613d0ff2
·georget on Feb 4 2016, 15:23.

Jan 29 2016

feat:unsaturated add plugin base class for UpscalingStagger
07cf02484278
·fabien on Jan 29 2016, 16:51.
fix:unsaturated Const-correctness for a few members of UnsaturatedVariables
c906d2dfe281
·fabien on Jan 29 2016, 16:44.
fix:unsaturated API of ItizializeVariables plugin
38fcc4f2a0c0
·fabien on Jan 29 2016, 16:39.
feat:unsaturated share simulation data through a unified struct
5a0ff54ef63c
·fabien on Jan 29 2016, 16:30.

Jan 28 2016

fix:unsaturated add OptionsVector as its own class
5a5b0d18024f
·fabien on Jan 28 2016, 01:16.

Jan 27 2016

impr:unsaturated add a few members to BoundaryConditions
31924008cc60
·fabien on Jan 27 2016, 22:37.
fix:unsaturated API consistency for Transport stagger
48c2baac78e2
·fabien on Jan 27 2016, 15:29.
impr:unsaturated EquilibriumStagger uses BoundaryCondtions
c6a4efb23f34
·fabien on Jan 27 2016, 15:29.
fix:unsaturated Boundary Conditions can change the constraint of a node
76f6eb61488c
·fabien on Jan 27 2016, 15:01.

Jan 26 2016

impr:unsaturated transport stagger use the new boundary condtions
4ea31a69af86
·fabien on Jan 26 2016, 22:40.
feat:unsaturated: add global BoundaryConditions handler
c008333c65c3
·fabien on Jan 26 2016, 22:35.

Jan 23 2016

feat:unsaturated add an empty base classe for variable initialization
0b7da50de539
·fabien on Jan 23 2016, 21:10.

Jan 9 2016

reactmicp:unsaturated first version that really works
bd80dafda1b1
·fabien on Jan 9 2016, 20:28.

Jan 3 2016

license: modify license to include year 2016
235eaf0b5b35
·fabien on Jan 3 2016, 00:04.

Jan 2 2016

impr:reactmicp change check of variables using the new module
78496b77e932
·fabien on Jan 2 2016, 20:19.

Dec 31 2015

impr:reactmicp use pimpl_ptr in unsaturated system
d20480d9c835
·fabien on Dec 31 2015, 17:05.

Dec 28 2015

fix:reactmicp:openmp fix error due to const var
ddf7c6e91281
·fabien on Dec 28 2015, 19:19.
APIChange:reactmicp use const pointers in Upscaling staggers
f6034133dd56
·fabien on Dec 28 2015, 18:08.
APIChange:reactmicp add const to var pointers in transport staggers
422d844cc4b7
·fabien on Dec 28 2015, 17:32.
APIChange:reactmicp const pointer in chemistry staggers
4dbbf9cd6a19
·fabien on Dec 28 2015, 16:27.

Dec 21 2015

APIChange:reactmicp don't pass shared_ptr around
50aad6edff32
·fabien on Dec 21 2015, 03:17.

Dec 19 2015

impr: fix compilation warning (gcc and clang)
61a1e89e1271
·fabien on Dec 19 2015, 21:11.
impr: also reset porosity in unsaturated system
39e77c269de4
·fabien on Dec 19 2015, 19:48.

Dec 16 2015

fix: fix commit 9d4326f where some stuff where deleted by error
7960b6475c74
·fabien on Dec 16 2015, 22:15.
doc: remove lots of warning in doc generation
9d4326f47013
·fabien on Dec 16 2015, 17:49.

Nov 26 2015

fix: do not include gas equation if it is merged with the aqueous equation
b15da4066f57
·fabien on Nov 26 2015, 18:20.
fix: Add missing extern template instanciation in transport stagger
d274109c12fc
·fabien on Nov 26 2015, 18:19.
impr: what if the previous solution is not valid ?
60d533873806
·fabien on Nov 26 2015, 18:18.
impr: use average functions to do average in equations
13d195f6c7f5
·fabien on Nov 26 2015, 18:16.

Nov 23 2015

feat: use merged equations in transport stagger
7a5ed612bb39
·fabien on Nov 23 2015, 23:03.
feat: add merged equation gas+aqueous
9f263e40c9a9
·fabien on Nov 23 2015, 23:00.

Nov 21 2015

impr: add member to compute vapor pressure at a node
fe730a86a4bc
·fabien on Nov 21 2015, 00:48.

Nov 20 2015

fix : unsaturated reactive transport is working ! but slow...
a6c6bddc3c1f
·fabien on Nov 20 2015, 22:49.
feat: use new SaturationPressureEquation in transport stagger
05403a90982d
·fabien on Nov 20 2015, 15:07.
impr: use the template instanciation from equation units in transport stagger
ecdedfed7695
·fabien on Nov 20 2015, 15:07.
feat: add SaturationPressureEquation
9a2ffe1a0437
·fabien on Nov 20 2015, 15:07.
impr: use ValueChecker to check unsaturated variables
6ce35e10c6f3
·fabien on Nov 20 2015, 15:07.
impr: introduce FV1DOFEquation
276744263d3d
·fabien on Nov 20 2015, 15:05.

Nov 11 2015

Add openmp support in equilibrium/transport stagger
e56213af5020
·fabien on Nov 11 2015, 21:54.
API of equilibrium/transport staggers
008df9c9036e
·fabien on Nov 11 2015, 21:54.
Fix/correction/improvement of equilibrium stagger
49e681b556ec
·fabien on Nov 11 2015, 21:54.
variables_interface can initialize node with AdimensionnalExtractor
d536fc3e2489
·fabien on Nov 11 2015, 21:54.
Use relative residuals (per equation) in transport stagger
883b66536f20
·fabien on Nov 11 2015, 21:54.
Allow the user to give a scaling factor for the residuals of each equations
c4d70155deca
·fabien on Nov 11 2015, 21:54.
feat: support for a gas diffusivity per species
55a26ac091b1
·fabien on Nov 11 2015, 21:54.

Oct 26 2015

add EquilibriumStagger to unsaturated system
328860e72934
·fabien on Oct 26 2015, 23:06.
add EquilibriumConstraints to the unsaturated systems
19b14f34e6cc
·fabien on Oct 26 2015, 23:04.
impr: variables: doc, gas, chemistry
c61df97b5350
·fabien on Oct 26 2015, 23:02.
doc : some documentations for transport equations and stagger
ed266db573ec
·fabien on Oct 26 2015, 22:55.

Oct 22 2015

impr: add VariablesInterface in unsaturated system
c9febc252301
·fabien on Oct 22 2015, 22:40.

Oct 21 2015

fix: transport stagger and equations for drying stagger
574c04e43124
·fabien on Oct 21 2015, 22:11.
fix : fix transport constraints
137ca1c0b377
·fabien on Oct 21 2015, 22:10.
fix: fix variables for the drying example
b725b3cc80ed
·fabien on Oct 21 2015, 22:09.

Oct 14 2015

Transport stagger for unsaturated system
1d28f469e61d
·fabien on Oct 14 2015, 22:03.
Aqueous liquid transport equation (unsaturated)
9de2802aad38
·fabien on Oct 14 2015, 22:03.
Gas diffusion equation (unsaturated)
0faef04ff3bc
·fabien on Oct 14 2015, 22:03.
Saturation Equation (unsaturated)
e96f9ec8af07
·fabien on Oct 14 2015, 22:03.
TransportConstraints : constraints for transport equations
9f400fef0c2a
·fabien on Oct 14 2015, 22:03.
Variables for the unsaturated reactive transport system
4e3d1dd452a3
·fabien on Oct 14 2015, 22:03.

Aug 11 2015

impr: use pimpl idiom in transprot stagger
87008f18555b
·fabien on Aug 11 2015, 18:16.
impr: flag to use chemistry rate in residual computation
f55d9b72639e
·fabien on Aug 11 2015, 16:49.

Jun 22 2015

Modify signature of AdimensionalSystemSolver constructors
1212aabdfff4
·fabien on Jun 22 2015, 20:58.

May 22 2015

Add UserTermination in DiffusiveUpscalingStagger
a7f264f4cbb4
·fabien on May 22 2015, 15:44.

May 20 2015

Correct (?) treatment of fixed components
c082bf825032
·fabien on May 20 2015, 15:03.

May 18 2015

Remove duplicate line in transport staggerd of saturated system
7499194f1147
·fabien on May 18 2015, 20:13.
Add SPECMICP_DLL_PUBLC/SPECMICP_DLL_LOCAL attributes in reactmicp
11a3e9886bfd
·fabien on May 18 2015, 00:33.

May 13 2015

Namespace documentation
ef44ef6723d3
·fabien on May 13 2015, 15:36.

May 12 2015

Kinetic stagger for ReactMiCP
5c3bb71fa606
·fabien on May 12 2015, 19:38.

May 5 2015

Add a simple DiffusiveUpscalingStagger
121163d3d7a7
·fabien on May 5 2015, 20:01.

May 3 2015

Give access to the vector of AdimensionalSystemSolution
e961026e5a94
·fabien on May 3 2015, 22:21.

Apr 28 2015

Fixes to compile with Clang (3.6.0)
9c9d231a7dfd
·fabien on Apr 28 2015, 01:27.

Apr 24 2015

Fix/Improve reactmicp return code handling
ce616e309344
·fabien on Apr 24 2015, 16:45.

Apr 21 2015

correct inclusion of headers
4dde22e2e8fc
·fabien on Apr 21 2015, 21:58.

Apr 15 2015

License update before release
b174f1ddf352
·tag: 0.0.3
·fabien on Apr 15 2015, 22:11.

Apr 2 2015

Update licence
ed9f62bffad3
·fabien on Apr 2 2015, 02:56.
No diffusion of the electron
d8b65021bdf9
·branch: oxydoreduc
·fabien on Apr 2 2015, 02:34.

Mar 25 2015

Update ReactMiCP for the new databse module
3240263f41a0
·fabien on Mar 25 2015, 20:22.

Mar 24 2015

Remove all the old code in the reactmicp folder
dfd04be5d63c
·fabien on Mar 24 2015, 19:06.

Mar 19 2015

Improve the OpenMP section
cb15e034fead
·tag: 0.0.2
·fabien on Mar 19 2015, 19:16.

Mar 17 2015

Add the member reset_main_variables in reactmicp::solver::VariablesBase
e5adba3b79c0
·fabien on Mar 17 2015, 15:42.

Mar 13 2015

Remove the check for Total concentration too small in the reactive transport…
2ab1f72f9891
·fabien on Mar 13 2015, 04:14.
Remove the cut-off for including a component in the total concentration; the…
d16ed536054f
·fabien on Mar 13 2015, 02:55.

Mar 6 2015

add member function is SaturatedVariables to access main variables directly
331aa30110ba
·fabien on Mar 6 2015, 14:42.

Feb 28 2015

Add a member in SaturatedReact::Variables to reset the main variables
67e8b2d9680e
·fabien on Feb 28 2015, 23:33.

Feb 26 2015

save the ndf in the transport program and set inline
f7c3cd7d6b9b
·fabien on Feb 26 2015, 15:21.

Feb 25 2015

obtain chemistry error in reactive transport solver, fixes issue #16
7ea49ff12a15
·fabien on Feb 25 2015, 22:07.

Feb 23 2015

Use the immobile concentration instead of the solid concentration, include the…
602cfb4f2886
·fabien on Feb 23 2015, 20:17.
Add the possibility to use a different constraints for each node
6a53d7d1a970
·fabien on Feb 23 2015, 20:17.
Do not compute speciation for a component if the total concentration is <1e-10
7c8016b56303
·fabien on Feb 23 2015, 20:17.
Solve the advection problem with the upstream scheme
912b33a4f6ec
·fabien on Feb 23 2015, 20:17.