Diffusion tamaas (features/netcdf-mpi) History

netcdf-mpi621f49e8820dd0709c1c84f…

Jul 11 2020

passing test for FFTMPI on multicomponents grid
621f49e8820d
·frerot on Jul 11 2020, 20:08.
implemented + tested mpi version of FFTEngine::computeFrequencies
0672d04558bb
·frerot on Jul 11 2020, 17:34.
testing FFTWMPIEngine
77f5b675fc9d
·frerot on Jul 11 2020, 05:17.

Jul 10 2020

Merge branch 'master' into feature/mpi_fft_engine
0defcff64961
·frerot on Jul 10 2020, 23:59.
redirecting iostreams to python streams for solve functions
6124726e1b08
·frerot on Jul 10 2020, 23:27.
using std::shared_ptr<Functional> as holder type for functionals
aba0a246fdf6
·frerot on Jul 10 2020, 18:04.
using Partitioner in FFTWMPIEngine
35c4836d6e63
·frerot on Jul 10 2020, 00:27.
added polymorphism to FFTEngines
0752a2fdb670
·frerot on Jul 10 2020, 00:06.

Jul 9 2020

have the same seed for surface gentor across mpi processes
6c2964a9d4d1
·frerot on Jul 9 2020, 20:35.
adding tests for partitioner
9775a947c07f
·frerot on Jul 9 2020, 20:34.
removed stray tm.finalize's in tests
212e9544374c
·frerot on Jul 9 2020, 17:49.
split fftw mpi interface
ebfd54d08a16
·frerot on Jul 9 2020, 16:58.
passing communicator to mpi interface instead of assuming WORLD
4ced5dac6591
·frerot on Jul 9 2020, 16:30.

Jul 6 2020

tentative implementation of surface generation with mpi
5b293e6eba23
·frerot on Jul 6 2020, 04:17.

Jul 4 2020

added mpi reductions to loops
3f746e302ec4
·frerot on Jul 4 2020, 15:44.

Jul 2 2020

logging info on root proc
dfa9798ca373
·frerot on Jul 2 2020, 17:34.
added FFTMPIEngine
8facf8e0cda6
·frerot on Jul 2 2020, 16:59.

Jul 1 2020

added rank and reduce to mpi interface
8327d3f42110
·frerot on Jul 1 2020, 15:24.
no need for type traits to print enum labels
962ac4122e60
·frerot on Jul 1 2020, 15:14.
added reserve method to array and grid base
ddca5e722d54
·frerot on Jul 1 2020, 05:23.
allowing subclasses of FFTEngine
cb641f5bb816
·frerot on Jul 1 2020, 05:20.
safeguarding initialization functions
ddd01b4279a8
·frerot on Jul 1 2020, 05:20.

Jun 28 2020

proper initializing of mpi and fftw with threads
1a1af8988bd3
·frerot on Jun 28 2020, 17:32.
making fftengine internals more accessible for subclassing
37620cc9f8b9
·frerot on Jun 28 2020, 15:09.
ensuring initialize and finalized get called
04fa2ac30483
·frerot on Jun 28 2020, 03:09.

Jun 25 2020

getting rid of BOOST_PP_STRINGIZE
f1073dba0c14
·frerot on Jun 25 2020, 17:43.
added access to yield stress and hardening modulus in residual
7dbb2d1099f2
·frerot on Jun 25 2020, 16:42.
removed FFTPlanManager and consorts
a66ead09e464
·frerot on Jun 25 2020, 03:06.
simplified alloc of in/out pointers in FFTEngine
aa1de33be858
·frerot on Jun 25 2020, 02:38.
making FFTEngine work with fftw flags >= FFTW_MEASURE
5b7d5e177fcd
·frerot on Jun 25 2020, 02:24.
removed remaining calls to FFTPlanManager
8f3b1410b161
·frerot on Jun 25 2020, 00:54.

Jun 24 2020

cleaning up the use of preprocessor macros
3cc1d8a160a7
·frerot on Jun 24 2020, 05:07.
removed unecessary LONG_PRECISION macro guard for fftw interface
548c812ae786
·frerot on Jun 24 2020, 04:28.
moved implementation of legacy surface statistics to separate cpp
75a2de973a73
·frerot on Jun 24 2020, 04:16.
using holder type for fftw plans in FFTEngine
d66116666bb9
·frerot on Jun 24 2020, 01:18.
fixing long double fftw interface
b4bacea3061c
·frerot on Jun 24 2020, 01:16.
converted statistics to FFTEngine
6bd8cd25056a
·frerot on Jun 24 2020, 00:18.

Jun 23 2020

converted surface generators to FFTEngine
a6e0bde62253
·frerot on Jun 23 2020, 23:52.
using FFTEngine in Westergaard integral operator
4e2d7b75fd90
·frerot on Jun 23 2020, 21:14.
adding computeFrequencies to FFTEngine
be7bc1258547
·frerot on Jun 23 2020, 21:13.

Jun 22 2020

added FFTEngine class
f8e1e9c7a919
·frerot on Jun 22 2020, 20:54.

Jun 18 2020

added __contains__ and __iter__ to model bindings
2c3c3ddadf5a
·frerot on Jun 18 2020, 16:23.

Jun 12 2020

added const for some variables
8af0575bda15
·frerot on Jun 12 2020, 01:07.

Jun 2 2020

simplify git diff stored in binary
64ad818b2ad5
·frerot on Jun 2 2020, 20:39.

May 5 2020

removing unused files
143a681c1611
·frerot on May 5 2020, 18:40.
updating copyright years
ae0010d56921
·frerot on May 5 2020, 18:13.
always compiling tamaas_info, even when strip_info==True
4884455e012f
·frerot on May 5 2020, 17:30.

Apr 29 2020

better generation of information file
c1bb3fddf59a
·frerot on Apr 29 2020, 16:34.

Apr 28 2020

fixed memory error in transformOutput
c0aa1c51f0e8
·frerot on Apr 28 2020, 21:27.
fixing convergence issue with non-linear solvers
09e51e6a41e7
·frerot on Apr 28 2020, 18:40.

Apr 20 2020

added -Wextra and fixed some warnings
43f7d9ba9056
·frerot on Apr 20 2020, 21:24.

Apr 17 2020

defining target aliases for main lib and python module
b1decc875a84
·frerot on Apr 17 2020, 20:59.

Apr 16 2020

added install dependencies to scons
9d061de7f380
·frerot on Apr 16 2020, 23:41.
allowing change of integration method in python + appropriate testing
32977d6d20b0
·frerot on Apr 16 2020, 17:31.
fixed cutoff integration [passes tests]
66893ed4c2da
·frerot on Apr 16 2020, 00:37.

Apr 15 2020

fixed segfault
668b7ec50e70
·frerot on Apr 15 2020, 05:13.

Apr 13 2020

finished implementing mindlin with cutoff [segfault on test]
4554024e4d17
·frerot on Apr 13 2020, 23:03.
implemented cutoff integration method [to be tested]
2a65f7fa885d
·frerot on Apr 13 2020, 02:52.

Apr 11 2020

added range over elements to accumulator class
1839e25c4cc7
·frerot on Apr 11 2020, 05:20.
better framework for coexisting integration methods
391e40f8eb10
·frerot on Apr 11 2020, 04:52.

Apr 10 2020

added framework for coexisting integration methods in kelvin
46cdc6715ce0
·frerot on Apr 10 2020, 16:53.

Apr 1 2020

added compile option to remove legacy code
131906bb58cc
·frerot on Apr 1 2020, 20:28.
avoid nans in equilibrium loop in kato saturated
87d3010da906
·frerot on Apr 1 2020, 20:26.

Dec 6 2019

adapted isopowerlaw exponent for 1d surfaces
72dcac543f03
·frerot on Dec 6 2019, 14:52.

Oct 4 2019

added -pedantic to compile flags (except pybind11)
903a03968664
·frerot on Oct 4 2019, 16:04.
[lint] performance suggestions from clang-tidy
374ff2b778cf
·frerot on Oct 4 2019, 10:07.

Sep 24 2019

[lint] removed dead code in surface stats
c12ade2646ab
·frerot on Sep 24 2019, 18:58.
linting on modernize-* rules in clang-tidy
35997c97068f
·frerot on Sep 24 2019, 18:48.
adding move operations on iterators
1372165db991
·frerot on Sep 24 2019, 18:47.

Sep 1 2019

setting previous pressures from model
90ab1d844e5d
·frerot on Sep 1 2019, 14:13.

Aug 15 2019

removed unecessary omp.h header in legacy bem_fft_base
8f348be2168f
·frerot on Aug 15 2019, 09:32.

Aug 13 2019

keeping openmp when tbb enabled because of tamaas::initialize
db0e2e12a4a3
·frerot on Aug 13 2019, 17:58.
added option to compile with TBB thrust backend
cd016f434e5f
·frerot on Aug 13 2019, 17:22.

Aug 5 2019

added flood-fill for 1D
57d91d59d23f
·frerot on Aug 5 2019, 14:52.

Jul 29 2019

fixed issues with long double warnings
32da06a0d51a
·frerot on Jul 29 2019, 18:09.

Jul 25 2019

necessary changes to make tests pass in long double
3842898f7a1d
·frerot on Jul 25 2019, 17:28.
typed DEFAULT_ALLOCATOR macro
90e9cdc70ad2
·frerot on Jul 25 2019, 14:10.

Jul 24 2019

added support for long integers and long doubles
17e2e4873937
·frerot on Jul 24 2019, 19:58.
adapted code to allow a change in integer type
10037a017efb
·frerot on Jul 24 2019, 14:39.

Jul 10 2019

moved eigenvalues computation to separate submodule + vonMises
05f6175eafb9
·frerot on Jul 10 2019, 12:21.

Jul 5 2019

safer interval search
4e71904bd6cf
·frerot on Jul 5 2019, 10:13.

Jul 4 2019

better solution than the dichotomy
53030a7c57b6
·frerot on Jul 4 2019, 17:22.
added dichotomy to KatoSaturated::enforceMeanValue
401dbef4f803
·frerot on Jul 4 2019, 15:21.

Jun 27 2019

update of hrms in pkr solver at beggining of solve
0c1d39d9afcb
·frerot on Jun 27 2019, 12:56.

Jun 20 2019

correct swap for sigma_0 and hardening
41fed3ca52fe
·frerot on Jun 20 2019, 16:40.

Jun 19 2019

implemented surface change from residual saturated displacements
5cff76969a2b
·frerot on Jun 19 2019, 16:23.

Jun 18 2019

added accessor to saturation pressure in KatoSaturated
0eeca3af2967
·frerot on Jun 18 2019, 14:28.

May 1 2019

removed __(BEGIN|END)_TAMAAS__ macros and replaced with namespace
cb09ff877dab
·frerot on May 1 2019, 12:58.

Apr 30 2019

registered total strain as field for model dump
4e2fe1bf852c
·frerot on Apr 30 2019, 14:18.
corrected stress computation when plastic strain is updated
24f363c4113e
·frerot on Apr 30 2019, 14:18.
added possibility to dump all fields of a model
2d5d7aabb8b4
·frerot on Apr 30 2019, 14:13.

Apr 11 2019

completed hijacking of PolonskyKeer by Kato
b92d7cbb4f0f
·frerot on Apr 11 2019, 09:19.

Apr 10 2019

implemented saturated solver
301deea6ae90
·frerot on Apr 10 2019, 17:47.

Apr 5 2019

implemented accelerated fixed point solver
23ec89441337
·frerot on Apr 5 2019, 16:23.
added simple logging capabilities
a240eb50bf7e
·frerot on Apr 5 2019, 16:22.

Apr 2 2019

python mode indication for scons files
9421fbf34ead
·frerot on Apr 2 2019, 12:27.

Apr 1 2019

added logo and updated documentation
e32b40407aef
·frerot on Apr 1 2019, 14:49.

Mar 14 2019

fixed eigenvalues + proper test
5c99be7b00c2
·frerot on Mar 14 2019, 10:57.

Mar 13 2019

added eigenvalue computation on fields
73057c1f714c
·frerot on Mar 13 2019, 19:53.
replaced registered fields with shared pointers
3e2bb81840fb
·frerot on Mar 13 2019, 19:52.

tamaas/srcfeatures/netcdf-mpi621f49e8820dd0709c1c84f…

Jul 11 2020

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tamaas/src
features/netcdf-mpi621f49e8820dd0709c1c84f…