Diffusion tamaas (features/netcdf-mpi) History

netcdf-mpiabfdd8cd28b02309e80496b…

Jun 2 2021

compiling tests with cuda
de1480b0e7ae
·frerot on Jun 2 2021, 20:39.

Jun 1 2021

correctly computing contact area in mpi context
cdc6ac1a08f9
·frerot on Jun 1 2021, 00:04.

May 31 2021

corrected includes for cpp tests
3d1b4c64338f
·frerot on May 31 2021, 16:55.

May 25 2021

ensuring uniform surface generator seed accross processes
7e692627014a
·frerot on May 25 2021, 18:14.

Apr 29 2021

pretty printing secondary scons commands (tests + install)
5c88b7c45e1a
·frerot on Apr 29 2021, 17:27.

Apr 28 2021

better use of fixtures in tests
b56f89b4dba1
·frerot on Apr 28 2021, 16:10.

Apr 27 2021

test_patch_westergaard now tests all applicable model types
99aeeb8af4ed
·frerot on Apr 27 2021, 18:03.
removed legacy bem grid test file
d5841e5c2852
·frerot on Apr 27 2021, 00:02.
integrated autocorrelation test into test_surface
73019bea551e
·frerot on Apr 27 2021, 00:01.

Apr 26 2021

marking test_epic and westergaard_multi as xfail if backend == 'tbb'
93a4d5811ae9
·frerot on Apr 26 2021, 05:22.
cleaned up test fixtures (using parameter names)
4dbc3ee00066
·frerot on Apr 26 2021, 04:31.

Apr 25 2021

testing UVW writes
3438ff37dbe4
·frerot on Apr 25 2021, 23:48.
added JSON dumping capability and fixed dump issues ∀ model types
0d37c22cb392
·frerot on Apr 25 2021, 23:37.

Apr 20 2021

mpi-compatible implementation of getClusters()
64e101c13b91
·frerot on Apr 20 2021, 21:23.

Apr 19 2021

allowing model read from HDF5 with MPI
86e5cb1e1789
·frerot on Apr 19 2021, 20:09.

Apr 17 2021

added read method to NetCDFDumper
97bffadf7b6a
·frerot on Apr 17 2021, 01:04.
added sequential read function to H5Dumper
0ba6912bc122
·frerot on Apr 17 2021, 00:21.

Apr 16 2021

added read method to FieldDumper (raises RuntimeError)
0fad580005ff
·frerot on Apr 16 2021, 23:04.
added read() method to NumpyDumper
da270d6f9606
·frerot on Apr 16 2021, 22:55.

Mar 20 2021

[doc] silencing warnings when generating documentation
6c56b69be4a2
·frerot on Mar 20 2021, 00:57.

Mar 15 2021

using SCons File and Dir instead of os.path functions
8ea64976e79c
·frerot on Mar 15 2021, 01:19.

Mar 14 2021

avoid using main_env in SConscripts
70977949d1a6
·frerot on Mar 14 2021, 04:34.

Mar 8 2021

using absolute path for env variables with `scons test`
659ebdd10165
·frerot on Mar 8 2021, 17:47.

Mar 3 2021

[ci] added gitlab ci file
0c1bc986d3bc
·frerot on Mar 3 2021, 23:02.
[tests] not running mpi googletest if not compiled with mpi
881abfa51439
·frerot on Mar 3 2021, 21:42.

Feb 16 2021

using tmp_path fixture for dumper tests
1b416aafdfde
·frerot on Feb 16 2021, 21:22.

Jan 7 2021

Merge branch 'deprecated_bindings'
10e17acc88ce
·frerot on Jan 7 2021, 01:58.
removed all legacy code
8b01fcdb4d21
·frerot on Jan 7 2021, 01:32.
deprecated old bindings
dd37e82c03d3
·frerot on Jan 7 2021, 01:28.

Jan 5 2021

[TESTS] setting OMP_NUM_THREADS=1 in scons test
5ea22488f452
·frerot on Jan 5 2021, 21:37.
added traction and displacement properties to model bindings
74509e1d1987
·frerot on Jan 5 2021, 18:13.

Jan 1 2021

Dec 31 2020

updated tests for new interface
cbd238489088
·frerot on Dec 31 2020, 18:10.

Dec 15 2020

[TEST] added an mpi version of plasticity patch test
1597124d7ae9
·frerot on Dec 15 2020, 20:53.

Dec 14 2020

renamed USE_CUDA macro to TAMAAS_USE_CUDA
44fd0470bd21
·frerot on Dec 14 2020, 18:05.

Dec 10 2020

not writing gtest xml with mpirun
0670ef204b92
·frerot on Dec 10 2020, 17:11.
properly setting size of underlying array in grid views
cbef215a579d
·frerot on Dec 10 2020, 03:24.
skipping headless test when not on root process
6497fb26e47c
·frerot on Dec 10 2020, 00:35.

Dec 9 2020

fixed a bug in the computation of grid strides
10c9ddd1e0e0
·frerot on Dec 9 2020, 22:56.
added back the old pkr mpi test
50989776262e
·frerot on Dec 9 2020, 17:17.

Dec 8 2020

correcting fundamental mode only on root rank
02240a9f1952
·frerot on Dec 8 2020, 22:20.
not running mpi h5dumper test when hdf5 has no mpi support
12b7e837ead0
·frerot on Dec 8 2020, 19:45.

Dec 7 2020

adding has_mpi to TamaasInfo class
09634dfd5d9d
·frerot on Dec 7 2020, 18:06.

Dec 5 2020

added tolerance on components tests
d9c3d9f292da
·frerot on Dec 5 2020, 00:14.

Dec 4 2020

prepared implementation of parallel dumpers
a9371b17cdd2
·frerot on Dec 4 2020, 22:23.

Dec 1 2020

changed tm.to_voigt uses to tm.compute.to_voigt
90e419eb7a0a
·frerot on Dec 1 2020, 22:35.
moved mpi function bindings to their own submodule
f9fadc483c40
·frerot on Dec 1 2020, 21:44.
fixing fftwmpi tests
efd5776aa2c0
·frerot on Dec 1 2020, 21:23.
testing parallel pkr with hertz instead of sequential pkr
4022e3acd5e6
·frerot on Dec 1 2020, 21:23.

Nov 25 2020

adjusting mpi tests
14f13ab72ad0
·frerot on Nov 25 2020, 21:31.
added backwards fft 2d tests (counterpart of mpi test)
945eedca11ad
·frerot on Nov 25 2020, 21:28.

Sep 3 2020

turn on flag TAMAAS_USE_PYTHON
eeeb65577eff
·frerot on Sep 3 2020, 23:28.
adjusting tolerance of test FFT1D2Comp
671a3a805986
·frerot on Sep 3 2020, 23:15.

Sep 1 2020

Merge branch 'master' into feature/mpi_fft_engine
ddb30ba41df9
·frerot on Sep 1 2020, 23:22.

Aug 31 2020

linking with libpython${version} to test_gtest_all
5471cb70c676
·frerot on Aug 31 2020, 18:22.

Aug 13 2020

added helper method to compute (corrected) contact areas
c9eb34ff4665
·frerot on Aug 13 2020, 17:15.

Aug 7 2020

fixing errors for python 2
69c13358055d
·frerot on Aug 7 2020, 22:56.
making sure libTamaas is linked first
87df0438ac11
·frerot on Aug 7 2020, 20:21.

Aug 6 2020

adding a backwards transform test
32f729beef69
·frerot on Aug 6 2020, 01:26.
reducing float test tolerance to 4ε
9d631430e38f
·frerot on Aug 6 2020, 01:22.

Aug 4 2020

netcdf dumper now writes frames to a single file
357aabe906d0
·frerot on Aug 4 2020, 23:02.

Aug 3 2020

Merge branch 'feature/dfsane'
0aff1cd1a985
·frerot on Aug 3 2020, 21:28.
testing all non-linear solvers in plasticity patch test
65b794bf9f7b
·frerot on Aug 3 2020, 21:27.
tested implementation of C++ DFSANESolver
510fc333cb53
·frerot on Aug 3 2020, 19:41.

Aug 2 2020

allowing compilation without OpenMP
d6d8134e1bba
·frerot on Aug 2 2020, 02:07.

Jul 31 2020

prettier compilation outputs in non-verbose mode
d38b418143c0
·frerot on Jul 31 2020, 22:17.

Jul 29 2020

renamed packaging_setup option to build_static_lib
cbe79569b127
·frerot on Jul 29 2020, 16:29.

Jul 22 2020

relaxing threshold in patch plasticity test
ba57121986ad
·frerot on Jul 22 2020, 14:03.
allow pickles in numpy dumper test (default changed in 1.16.1)
10e89fb76a8c
·frerot on Jul 22 2020, 14:02.

Jul 17 2020

using global datasize/nbpoints functions when needed
e51c229537c2
·frerot on Jul 17 2020, 21:04.
testing PolonskyKeerRey in MPI
41cf38d51bcf
·frerot on Jul 17 2020, 19:24.

Jul 16 2020

addind test for mpi model creation
a7af53db8efa
·frerot on Jul 16 2020, 04:57.
allowing runs of several mpi routine tests
4921b6ec6a4c
·frerot on Jul 16 2020, 04:55.

Jul 15 2020

proper singleton for mpi::comm::world ensures working seq_guard
a9660ef02eed
·frerot on Jul 15 2020, 21:56.

Jul 12 2020

upgrading dockerfile and jenkinsfile for mpi tests
fa4fef35f40f
·frerot on Jul 12 2020, 17:32.
protected gtests that need to be run in sequential with guard
0e475acfc2fe
·frerot on Jul 12 2020, 14:13.
added mpi::sequential_guard
254daee554df
·frerot on Jul 12 2020, 14:12.
proper testing of mpi-enabled routines in python
cb2acaf61c4c
·frerot on Jul 12 2020, 03:59.
removed explicit refs to MPI_COMM_WORLD
6819d831b8a4
·frerot on Jul 12 2020, 01:29.

Jul 11 2020

computeFrequencies now takes local sizes as argument
2696ba6deb02
·frerot on Jul 11 2020, 23:01.
running googletests with mpirun from pytest
fd5aedbcfb11
·frerot on Jul 11 2020, 20:33.
passing test for FFTMPI on multicomponents grid
621f49e8820d
·frerot on Jul 11 2020, 20:08.
implemented + tested mpi version of FFTEngine::computeFrequencies
0672d04558bb
·frerot on Jul 11 2020, 17:34.
testing FFTWMPIEngine
77f5b675fc9d
·frerot on Jul 11 2020, 05:17.

Jul 10 2020

Merge branch 'master' into feature/mpi_fft_engine
0defcff64961
·frerot on Jul 10 2020, 23:59.
added polymorphism to FFTEngines
0752a2fdb670
·frerot on Jul 10 2020, 00:06.

Jul 9 2020

adding tests for partitioner
9775a947c07f
·frerot on Jul 9 2020, 20:34.
ignoring DeprecationWarning with pytest.ini config file
1dcf00b3cf42
·frerot on Jul 9 2020, 19:40.
removed stray tm.finalize's in tests
212e9544374c
·frerot on Jul 9 2020, 17:49.

Jul 4 2020

added mpi reductions to loops
3f746e302ec4
·frerot on Jul 4 2020, 15:44.

Jul 3 2020

setting proper rpath for tests
f16ec5b85e49
·frerot on Jul 3 2020, 04:53.

Jun 25 2020

fixing CPPDEFINES
2581cf15be7f
·frerot on Jun 25 2020, 16:18.
removed FFTPlanManager and consorts
a66ead09e464
·frerot on Jun 25 2020, 03:06.
making sure libTamaas from build is loaded when running tests
531937f6e06f
·frerot on Jun 25 2020, 02:43.
making FFTEngine work with fftw flags >= FFTW_MEASURE
5b7d5e177fcd
·frerot on Jun 25 2020, 02:24.
removed remaining calls to FFTPlanManager
8f3b1410b161
·frerot on Jun 25 2020, 00:54.

Jun 24 2020

Merge branch 'master' into feature/fft_engine
3796abfaa1cd
·frerot on Jun 24 2020, 22:18.
added header report for pytest
22578f2b019d
·frerot on Jun 24 2020, 22:13.
reducing system size of test_epic
9919a84cfd1d
·frerot on Jun 24 2020, 19:18.
removed legacy surface generator in test_autocorrelation
d5baa0511b25
·frerot on Jun 24 2020, 05:34.

tamaas/testsfeatures/netcdf-mpiabfdd8cd28b02309e80496b…

Jun 2 2021

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Jun 24 2020

tamaas/tests
features/netcdf-mpiabfdd8cd28b02309e80496b…