Diffusion tamaas (petsc) History

History
petsc880e1e593dd1a0e30f87d16…

Apr 17 2023

added material property to residual
880e1e593dd1
·frerot on Apr 17 2023, 13:44.
correct variable name in materials wrapper
e7545e61d705
·frerot on Apr 17 2023, 13:30.

Mar 14 2023

random phases set to zero where expected by C2R transform
4f40cc109eed
·frerot on Mar 14 2023, 18:13.
added function to compute real coefficient indices of dft
ffd04dcf6cca
·frerot on Mar 14 2023, 17:46.
corrected typo
f7bfcca920bb
·frerot on Mar 14 2023, 17:43.

Feb 9 2023

made EPICSolver compatible with utils.load_path
4e08a8a94094
·frerot on Feb 9 2023, 14:35.

Jan 31 2023

correctly deprecated residual constructor
e01b77d8621f
·frerot on Jan 31 2023, 17:06.
added ModelFactory.registerHookeField to Python API
380b06e8d1e4
·frerot on Jan 31 2023, 14:55.

Jan 30 2023

removed tests/ci/script submodule
b9dabc584b89
·frerot on Jan 30 2023, 17:15.
deprecating ModelFactory.createResidual
3be5dd33a744
·frerot on Jan 30 2023, 17:06.
python API for materials
1799cd8d00b6
·frerot on Jan 30 2023, 15:50.
removed inelastic strain compute from Material interface
59332d6f57aa
·frerot on Jan 30 2023, 14:38.
updated copyright notice for materials
2912874fce23
·frerot on Jan 30 2023, 14:00.
copyright in multiline string
fe804fbd068a
·frerot on Jan 30 2023, 11:00.

Jan 27 2023

removed NoConvergence import
c05110a124ec
·frerot on Jan 27 2023, 17:39.
linting
42f2d671651b
·frerot on Jan 27 2023, 15:59.
fixed deprecation warnings
3db25847471e
·frerot on Jan 27 2023, 15:44.
simplified Residual API
9af1338e0168
·frerot on Jan 27 2023, 15:21.

Jan 26 2023

acknowledging DFG funding
d46c09dc6602
·frerot on Jan 26 2023, 09:41.

Jan 25 2023

removed model_type template in materials
d0db1c5e6e0a
·frerot on Jan 25 2023, 15:05.
fix unused argument warning
9fa61ec99794
·frerot on Jan 25 2023, 11:13.
avoid deleting contents of compile_commands.json
b1d0121c9d04
·frerot on Jan 25 2023, 10:46.

Jan 24 2023

removing unwanted files from compile_commands db
21cac39091a6
·frerot on Jan 24 2023, 13:27.
also removing files in build
bdc112fcdddd
·frerot on Jan 24 2023, 12:39.
removing the right files
eba3cc951758
·frerot on Jan 24 2023, 11:00.

Jan 23 2023

removing mpi sensitive code from clang-tidy
145b1b00076b
·frerot on Jan 23 2023, 18:17.
reactivated clang-tidy and added mypy to ci
2c12b065e12c
·frerot on Jan 23 2023, 17:41.
clang-tidy fixes
c89736ea9431
·frerot on Jan 23 2023, 17:41.
python static type compliance
e33c4f6bd9ba
·frerot on Jan 23 2023, 15:56.
added example of radial averages in examples/statistics.py
100449b2a711
·frerot on Jan 23 2023, 13:48.

Jan 18 2023

linting
e4b60827f047
·frerot on Jan 18 2023, 17:26.
added eigenstress computation to material
62d43b3b1968
·frerot on Jan 18 2023, 17:24.
removed old hardening code
a4f96914d0dd
·frerot on Jan 18 2023, 15:29.
Merge branch 'features/materials'
ef80ea4721c8
·frerot on Jan 18 2023, 15:09.

Jan 17 2023

updated copyright year 2023
24902e40d876
·frerot on Jan 17 2023, 18:39.

Dec 23 2022

release 2.6.0
e168938888eb
·tag: v2.6.0
·frerot on Dec 23 2022, 11:36.

Nov 18 2022

FIX: UVWDumper does not write FieldData anymore
57458505b1bf
·frerot on Nov 18 2022, 17:10.

Nov 16 2022

FIX: linting
d6118d6704dc
·frerot on Nov 16 2022, 11:27.
FIX: using boundary_fields attribute in HDF5 files
a0f93b19d259
·frerot on Nov 16 2022, 10:54.

Nov 11 2022

ENH: dumping surface field names
9244feaf1a70
·frerot on Nov 11 2022, 15:02.

Nov 9 2022

ENH: added warning on empty dumper list
793715fb14bb
·frerot on Nov 9 2022, 11:12.

Nov 7 2022

FIX: lint
382c4bff5eed
·frerot on Nov 7 2022, 15:40.
ENH: added request method to FieldContainer for restarts
b561d780669b
·frerot on Nov 7 2022, 14:32.

Nov 4 2022

DOC: added to faq
17d529780b54
·frerot on Nov 4 2022, 10:09.

Oct 25 2022

DOC: started FAQ
b8365562502a
·frerot on Oct 25 2022, 14:37.

Oct 5 2022

refreshed grant links in README
5ffd2d07b4f3
·frerot on Oct 5 2022, 19:01.

Sep 27 2022

changed stopping criterion for saturated solver
5083cb5f25b3
·frerot on Sep 27 2022, 10:31.

Sep 20 2022

linting
19523875da76
·frerot on Sep 20 2022, 16:16.
added finite difference rms slopes method
b4a4b77f3b96
·frerot on Sep 20 2022, 13:31.

Sep 14 2022

testing plasticity with Ny = 1 (plane strain)
89d122f9d03b
·frerot on Sep 14 2022, 10:50.

Sep 13 2022

added .mailmap
5d89f88979e4
·frerot on Sep 13 2022, 13:11.
removed conditional branching in PKR loops
80ac616e4763
·frerot on Sep 13 2022, 11:44.

Sep 9 2022

raising exception when model is created with zero dimension
5af9f717d0f1
·frerot on Sep 9 2022, 11:23.

Sep 8 2022

fixed HookeField test: run in sequential
5202aa939431
·frerot on Sep 8 2022, 17:17.
added test for HookeField
7bb4bacf6434
·frerot on Sep 8 2022, 15:40.
added HookeField operator
064604ef10e4
·frerot on Sep 8 2022, 14:29.

Sep 7 2022

updated PyPI description
7d4cdf0318b1
·frerot on Sep 7 2022, 10:56.

Sep 6 2022

[doc] removed usage of ModelFactory
5b0b73fb9d46
·frerot on Sep 6 2022, 11:51.
[doc] added spack instructions
171ad2c553a0
·frerot on Sep 6 2022, 11:38.

Aug 30 2022

[doc] expanded on units
803a03861250
·frerot on Aug 30 2022, 14:38.

Aug 29 2022

[doc] added paragraph on units in model quantities
9f82752e613e
·frerot on Aug 29 2022, 16:19.
[doc] corrected mpi dump comment
eeae304bb23b
·frerot on Aug 29 2022, 14:45.

Aug 26 2022

removed stray print
d002b04ee2d1
·frerot on Aug 26 2022, 10:05.

Aug 25 2022

Sequential compilation by default
e8abd2be6389
·frerot on Aug 25 2022, 11:26.
accepting non-existing paths for install prefix
f7009f41730f
·frerot on Aug 25 2022, 11:18.
warning on unknown build variables
1608d19f7a1c
·frerot on Aug 25 2022, 11:18.

Aug 22 2022

linting
96c60334eadb
·frerot on Aug 22 2022, 15:31.
[CI] docker variables don't support bash substitution
b04f77dc3672
·frerot on Aug 22 2022, 14:17.
[CI] correctly setting wheel BOOST_ROOT
2bcc6ba06d49
·frerot on Aug 22 2022, 13:57.
[CI] using 20.04 LTS boost version (1.71.0) for wheels
664d88fdf37d
·frerot on Aug 22 2022, 13:47.
Using FieldContainer for integral operators
a2d2aa3c75bf
·frerot on Aug 22 2022, 13:10.
[doc] corrected data distribution error snippet
f5602878c806
·frerot on Aug 22 2022, 12:52.
moved field python interface to FieldContainer bindings
01ee3daf64fd
·frerot on Aug 22 2022, 10:57.

Aug 18 2022

using proper dtypes in NetCDFDumper
92c59a88dbfd
·frerot on Aug 18 2022, 17:40.
making Model use the FieldContainer interface
824c5e5ebb8d
·frerot on Aug 18 2022, 17:24.
added fields container interface
bdf8486d443a
·frerot on Aug 18 2022, 12:02.

Aug 16 2022

using a variant map for model fields
431595759fa0
·frerot on Aug 16 2022, 16:58.

Aug 15 2022

[CI] deactivating cuda
6a69b0facbfe
·frerot on Aug 15 2022, 18:31.
linting
5cafc080a6a9
·frerot on Aug 15 2022, 18:20.
implemented a static dispatch system
22170ad57277
·frerot on Aug 15 2022, 16:44.

Aug 12 2022

computeError in solvers should be const
88338b8beea5
·frerot on Aug 12 2022, 11:51.

Aug 9 2022

[doc] added MPI_Init warning
a8f4af179780
·frerot on Aug 9 2022, 11:12.

Aug 8 2022

proper reset of communicator in sequential guard
cd1aac06fd48
·frerot on Aug 8 2022, 11:14.

Aug 3 2022

[doc] Abort error code
1913cc886807
·frerot on Aug 3 2022, 13:28.
[doc] added error handling explanation for MPI partitioning
a9a45a968fc6
·frerot on Aug 3 2022, 10:45.

Jul 28 2022

explicit error when data partitions assigns no data
f185e714ed1b
·frerot on Jul 28 2022, 14:11.

Jul 21 2022

fixed mpi flood fill test
b9cfa0546a2e
·frerot on Jul 21 2022, 10:53.

Jul 20 2022

fixing extent drift in flood fill
2127da253b2f
·frerot on Jul 20 2022, 16:21.
fixed flood fill to properly account for pbcs for bbox
d2ad39955cff
·frerot on Jul 20 2022, 15:49.
avoiding include dependency problems with allocator
55a4d19e43cf
·frerot on Jul 20 2022, 13:18.

Jul 19 2022

avoiding scons errors in wheels build
6eeb023f4752
·frerot on Jul 19 2022, 17:17.
using all-version citation for zenodo archive
3803465f500f
·frerot on Jul 19 2022, 10:27.
fixed cuda allocator
3d55c5b7b145
·frerot on Jul 19 2022, 10:09.

Jul 18 2022

fixed interface of unified allocator
f667c8a652ea
·frerot on Jul 18 2022, 19:04.
added tests for the matvec interface of Hooke and Kelvin
68aa539608a9
·frerot on Jul 18 2022, 17:19.
more flexible constructors for grids
22dee88b743f
·frerot on Jul 18 2022, 16:59.
added a simple span<T> class to help manage memory views
912f89c59336
·frerot on Jul 18 2022, 16:28.
adding pytest option --log-debug to show debug output in tests
9ae275d10ede
·frerot on Jul 18 2022, 14:20.

Jul 16 2022

generic wrap constructor for Grid
056a26ce85d5
·frerot on Jul 16 2022, 19:32.
tidying Array's interface to wrap
805d588092f1
·frerot on Jul 16 2022, 19:32.

Historypetsc880e1e593dd1a0e30f87d16…

Apr 17 2023

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History
petsc880e1e593dd1a0e30f87d16…