Diffusion tamaas (features/netcdf-mpi) History

netcdf-mpicce181f1da1f122aa90388b…

Dec 1 2020

making an fftengine on the fly in stats functions
24b0fa8bbc51
·frerot on Dec 1 2020, 21:14.
added wrapping of local_{size,offset} partitioner functions
3503d740b538
·frerot on Dec 1 2020, 21:13.

Nov 27 2020

added some debug log messages
e290de0838e8
·frerot on Nov 27 2020, 17:52.

Nov 25 2020

Merge branch 'feature/mpi_fft_engine'
fdea6b4ef4a4
·frerot on Nov 25 2020, 21:35.
added experimental mpi warning
f5786e6cbeff
·frerot on Nov 25 2020, 21:29.

Oct 23 2020

added a function to compute deviatoric of sym tensor fields
54aab33e784a
·frerot on Oct 23 2020, 21:58.

Sep 1 2020

rename USE_MPI to TAMAAS_USE_MPI
a18819dd25e3
·frerot on Sep 1 2020, 23:26.
Merge branch 'master' into feature/mpi_fft_engine
ddb30ba41df9
·frerot on Sep 1 2020, 23:22.

Aug 31 2020

removed useless operator= for ToleranceManager
0f3eef3f390e
·frerot on Aug 31 2020, 21:15.
silenced warnings about deprecated copy ctors
5e6c40b035b2
·frerot on Aug 31 2020, 19:00.

Aug 13 2020

added helper method to compute (corrected) contact areas
c9eb34ff4665
·frerot on Aug 13 2020, 17:15.

Aug 8 2020

prefer this email
3838c1d4ac9d
·frerot on Aug 8 2020, 01:04.

Aug 6 2020

updating emails and refreshing pipe_tools
bb36f61af70a
·frerot on Aug 6 2020, 23:54.
allowing other fftw flags in mpi engine
80617eef9978
·frerot on Aug 6 2020, 01:24.
reducing float test tolerance to 4ε
9d631430e38f
·frerot on Aug 6 2020, 01:22.

Aug 3 2020

[DOC] adding paragraph on integration methods
4281604d9e17
·frerot on Aug 3 2020, 22:26.
Merge branch 'feature/dfsane'
0aff1cd1a985
·frerot on Aug 3 2020, 21:28.
allowing the use of ToleranceManager on C++ solvers
03fcf739ce5a
·frerot on Aug 3 2020, 21:20.
tested implementation of C++ DFSANESolver
510fc333cb53
·frerot on Aug 3 2020, 19:41.
avoid duplication of -fPIC flag
e1de40e29467
·frerot on Aug 3 2020, 16:09.

Aug 2 2020

allowing compilation without OpenMP
d6d8134e1bba
·frerot on Aug 2 2020, 02:07.

Aug 1 2020

tentative implementation of DFSANESolver
cf36e15d08a3
·frerot on Aug 1 2020, 01:42.

Jul 29 2020

renamed packaging_setup option to build_static_lib
cbe79569b127
·frerot on Jul 29 2020, 16:29.
packaging setup now generates static libTamaas
77e32d9a06e7
·frerot on Jul 29 2020, 03:21.

Jul 28 2020

adding $ORIGIN to libTamaas RPATH
9114496fb1c5
·frerot on Jul 28 2020, 00:19.

Jul 27 2020

adding version number to tamaas info
d200a63e05b6
·frerot on Jul 27 2020, 17:36.
added skeleton for DFSANE C++ solver
6a23416b0bff
·frerot on Jul 27 2020, 17:15.

Jul 24 2020

log warning instead of exception for possible overflow in kelvin
022c85aa37f2
·frerot on Jul 24 2020, 17:25.

Jul 17 2020

using global datasize/nbpoints functions when needed
e51c229537c2
·frerot on Jul 17 2020, 21:04.

Jul 15 2020

proper singleton for mpi::comm::world ensures working seq_guard
a9660ef02eed
·frerot on Jul 15 2020, 21:56.

Jul 14 2020

initializing model with local MPI sizes
9b70d3fba43f
·frerot on Jul 14 2020, 20:24.

Jul 12 2020

added mpi::sequential_guard
254daee554df
·frerot on Jul 12 2020, 14:12.
allowing 1D tests to pass
773514f8cf45
·frerot on Jul 12 2020, 02:59.
added a sequential context manager
ea6e316a0703
·frerot on Jul 12 2020, 01:30.
added some debug logs
b8ad8692d3ee
·frerot on Jul 12 2020, 01:30.
normalizing backward transforms in FFTWMPIEngine
6bd2aef6b143
·frerot on Jul 12 2020, 01:30.
removed explicit refs to MPI_COMM_WORLD
6819d831b8a4
·frerot on Jul 12 2020, 01:29.

Jul 11 2020

fixing concurrent random number generation
136efda36dc9
·frerot on Jul 11 2020, 23:02.
computeFrequencies now takes local sizes as argument
2696ba6deb02
·frerot on Jul 11 2020, 23:01.
fixing backwards mpi transforms
29100a290c77
·frerot on Jul 11 2020, 23:01.
passing test for FFTMPI on multicomponents grid
621f49e8820d
·frerot on Jul 11 2020, 20:08.
implemented + tested mpi version of FFTEngine::computeFrequencies
0672d04558bb
·frerot on Jul 11 2020, 17:34.
testing FFTWMPIEngine
77f5b675fc9d
·frerot on Jul 11 2020, 05:17.

Jul 10 2020

Merge branch 'master' into feature/mpi_fft_engine
0defcff64961
·frerot on Jul 10 2020, 23:59.
redirecting iostreams to python streams for solve functions
6124726e1b08
·frerot on Jul 10 2020, 23:27.
using std::shared_ptr<Functional> as holder type for functionals
aba0a246fdf6
·frerot on Jul 10 2020, 18:04.
using Partitioner in FFTWMPIEngine
35c4836d6e63
·frerot on Jul 10 2020, 00:27.
added polymorphism to FFTEngines
0752a2fdb670
·frerot on Jul 10 2020, 00:06.

Jul 9 2020

have the same seed for surface gentor across mpi processes
6c2964a9d4d1
·frerot on Jul 9 2020, 20:35.
adding tests for partitioner
9775a947c07f
·frerot on Jul 9 2020, 20:34.
removed stray tm.finalize's in tests
212e9544374c
·frerot on Jul 9 2020, 17:49.
split fftw mpi interface
ebfd54d08a16
·frerot on Jul 9 2020, 16:58.
passing communicator to mpi interface instead of assuming WORLD
4ced5dac6591
·frerot on Jul 9 2020, 16:30.

Jul 6 2020

tentative implementation of surface generation with mpi
5b293e6eba23
·frerot on Jul 6 2020, 04:17.

Jul 4 2020

added mpi reductions to loops
3f746e302ec4
·frerot on Jul 4 2020, 15:44.

Jul 2 2020

logging info on root proc
dfa9798ca373
·frerot on Jul 2 2020, 17:34.
added FFTMPIEngine
8facf8e0cda6
·frerot on Jul 2 2020, 16:59.

Jul 1 2020

added rank and reduce to mpi interface
8327d3f42110
·frerot on Jul 1 2020, 15:24.
no need for type traits to print enum labels
962ac4122e60
·frerot on Jul 1 2020, 15:14.
added reserve method to array and grid base
ddca5e722d54
·frerot on Jul 1 2020, 05:23.
allowing subclasses of FFTEngine
cb641f5bb816
·frerot on Jul 1 2020, 05:20.
safeguarding initialization functions
ddd01b4279a8
·frerot on Jul 1 2020, 05:20.

Jun 28 2020

proper initializing of mpi and fftw with threads
1a1af8988bd3
·frerot on Jun 28 2020, 17:32.
making fftengine internals more accessible for subclassing
37620cc9f8b9
·frerot on Jun 28 2020, 15:09.
ensuring initialize and finalized get called
04fa2ac30483
·frerot on Jun 28 2020, 03:09.

Jun 25 2020

getting rid of BOOST_PP_STRINGIZE
f1073dba0c14
·frerot on Jun 25 2020, 17:43.
added access to yield stress and hardening modulus in residual
7dbb2d1099f2
·frerot on Jun 25 2020, 16:42.
removed FFTPlanManager and consorts
a66ead09e464
·frerot on Jun 25 2020, 03:06.
simplified alloc of in/out pointers in FFTEngine
aa1de33be858
·frerot on Jun 25 2020, 02:38.
making FFTEngine work with fftw flags >= FFTW_MEASURE
5b7d5e177fcd
·frerot on Jun 25 2020, 02:24.
removed remaining calls to FFTPlanManager
8f3b1410b161
·frerot on Jun 25 2020, 00:54.

Jun 24 2020

cleaning up the use of preprocessor macros
3cc1d8a160a7
·frerot on Jun 24 2020, 05:07.
removed unecessary LONG_PRECISION macro guard for fftw interface
548c812ae786
·frerot on Jun 24 2020, 04:28.
moved implementation of legacy surface statistics to separate cpp
75a2de973a73
·frerot on Jun 24 2020, 04:16.
using holder type for fftw plans in FFTEngine
d66116666bb9
·frerot on Jun 24 2020, 01:18.
fixing long double fftw interface
b4bacea3061c
·frerot on Jun 24 2020, 01:16.
converted statistics to FFTEngine
6bd8cd25056a
·frerot on Jun 24 2020, 00:18.

Jun 23 2020

converted surface generators to FFTEngine
a6e0bde62253
·frerot on Jun 23 2020, 23:52.
using FFTEngine in Westergaard integral operator
4e2d7b75fd90
·frerot on Jun 23 2020, 21:14.
adding computeFrequencies to FFTEngine
be7bc1258547
·frerot on Jun 23 2020, 21:13.

Jun 22 2020

added FFTEngine class
f8e1e9c7a919
·frerot on Jun 22 2020, 20:54.

Jun 18 2020

added __contains__ and __iter__ to model bindings
2c3c3ddadf5a
·frerot on Jun 18 2020, 16:23.

Jun 12 2020

added const for some variables
8af0575bda15
·frerot on Jun 12 2020, 01:07.

Jun 2 2020

simplify git diff stored in binary
64ad818b2ad5
·frerot on Jun 2 2020, 20:39.

May 5 2020

removing unused files
143a681c1611
·frerot on May 5 2020, 18:40.
updating copyright years
ae0010d56921
·frerot on May 5 2020, 18:13.
always compiling tamaas_info, even when strip_info==True
4884455e012f
·frerot on May 5 2020, 17:30.

Apr 29 2020

better generation of information file
c1bb3fddf59a
·frerot on Apr 29 2020, 16:34.

Apr 28 2020

fixed memory error in transformOutput
c0aa1c51f0e8
·frerot on Apr 28 2020, 21:27.
fixing convergence issue with non-linear solvers
09e51e6a41e7
·frerot on Apr 28 2020, 18:40.

Apr 20 2020

added -Wextra and fixed some warnings
43f7d9ba9056
·frerot on Apr 20 2020, 21:24.

Apr 17 2020

defining target aliases for main lib and python module
b1decc875a84
·frerot on Apr 17 2020, 20:59.

Apr 16 2020

added install dependencies to scons
9d061de7f380
·frerot on Apr 16 2020, 23:41.
allowing change of integration method in python + appropriate testing
32977d6d20b0
·frerot on Apr 16 2020, 17:31.
fixed cutoff integration [passes tests]
66893ed4c2da
·frerot on Apr 16 2020, 00:37.

Apr 15 2020

fixed segfault
668b7ec50e70
·frerot on Apr 15 2020, 05:13.

Apr 13 2020

finished implementing mindlin with cutoff [segfault on test]
4554024e4d17
·frerot on Apr 13 2020, 23:03.
implemented cutoff integration method [to be tested]
2a65f7fa885d
·frerot on Apr 13 2020, 02:52.

Apr 11 2020

added range over elements to accumulator class
1839e25c4cc7
·frerot on Apr 11 2020, 05:20.
better framework for coexisting integration methods
391e40f8eb10
·frerot on Apr 11 2020, 04:52.

tamaas/srcfeatures/netcdf-mpicce181f1da1f122aa90388b…

Dec 1 2020

Nov 27 2020

Nov 25 2020

Oct 23 2020

Sep 1 2020

Aug 31 2020

Aug 13 2020

Aug 8 2020

Aug 6 2020

Aug 3 2020

Aug 2 2020

Aug 1 2020

Jul 29 2020

Jul 28 2020

Jul 27 2020

Jul 24 2020

Jul 17 2020

Jul 15 2020

Jul 14 2020

Jul 12 2020

Jul 11 2020

Jul 10 2020

Jul 9 2020

Jul 6 2020

Jul 4 2020

Jul 2 2020

Jul 1 2020

Jun 28 2020

Jun 25 2020

Jun 24 2020

Jun 23 2020

Jun 22 2020

Jun 18 2020

Jun 12 2020

Jun 2 2020

May 5 2020

Apr 29 2020

Apr 28 2020

Apr 20 2020

Apr 17 2020

Apr 16 2020

Apr 15 2020

Apr 13 2020

Apr 11 2020

tamaas/src
features/netcdf-mpicce181f1da1f122aa90388b…