Diffusion tamaas (master) History

History
master531937f6e06fb9249474523…

Jun 25 2020

making sure libTamaas from build is loaded when running tests
531937f6e06f
·frerot on Jun 25 2020, 02:43.
simplified alloc of in/out pointers in FFTEngine
aa1de33be858
·frerot on Jun 25 2020, 02:38.
making FFTEngine work with fftw flags >= FFTW_MEASURE
5b7d5e177fcd
·frerot on Jun 25 2020, 02:24.
removed remaining calls to FFTPlanManager
8f3b1410b161
·frerot on Jun 25 2020, 00:54.

Jun 24 2020

Merge branch 'master' into feature/fft_engine
3796abfaa1cd
·frerot on Jun 24 2020, 22:18.
added header report for pytest
22578f2b019d
·frerot on Jun 24 2020, 22:13.
reducing system size of test_epic
9919a84cfd1d
·frerot on Jun 24 2020, 19:18.
added short workflow description to contribution section
acb92043a41d
·D250
·frerot on Jun 24 2020, 18:00.
separated workflows for code reviews
4576418a9f6b
·D250
·frerot on Jun 24 2020, 17:52.
add reference to Archard_1957
53478e29a75b
·D249
·frerot on Jun 24 2020, 17:40.
Merge branch 'master' into arcpatch-D249
8c97f9be5457
·frerot on Jun 24 2020, 17:40.
add reference to Archard_1957
250c5d393fe5
·D249
·agshvarts / frerot on Jun 24 2020, 17:38.
added short workflow description to contribution section
9eff7d779bbd
·D250
·frerot on Jun 24 2020, 17:15.
added saturated pressure reference
4663aff62cc0
·frerot on Jun 24 2020, 16:54.
fixed heavy english syntax
c4c90c937206
·frerot on Jun 24 2020, 16:40.
added reference to condat + comment on how unique the code is
6257690b3ebb
·frerot on Jun 24 2020, 16:38.
added a "seeking help" section in doc
274414d905f3
·frerot on Jun 24 2020, 16:02.
cleaning doc before building it
326474e642c8
·frerot on Jun 24 2020, 15:57.
making sure sphinx can import the tamaas module for autodoc
9731ad93e058
·frerot on Jun 24 2020, 15:45.
removed legacy surface generator in test_autocorrelation
d5baa0511b25
·frerot on Jun 24 2020, 05:34.
compiling c++ tests needing pybind11 separately
7af541847c01
·frerot on Jun 24 2020, 05:30.
cleaning up the use of preprocessor macros
3cc1d8a160a7
·frerot on Jun 24 2020, 05:07.
removed unecessary LONG_PRECISION macro guard for fftw interface
548c812ae786
·frerot on Jun 24 2020, 04:28.
moved implementation of legacy surface statistics to separate cpp
75a2de973a73
·frerot on Jun 24 2020, 04:16.
using holder type for fftw plans in FFTEngine
d66116666bb9
·frerot on Jun 24 2020, 01:18.
fixing long double fftw interface
b4bacea3061c
·frerot on Jun 24 2020, 01:16.
converted statistics to FFTEngine
6bd8cd25056a
·frerot on Jun 24 2020, 00:18.

Jun 23 2020

converted surface generators to FFTEngine
a6e0bde62253
·frerot on Jun 23 2020, 23:52.
using FFTEngine in Westergaard integral operator
4e2d7b75fd90
·frerot on Jun 23 2020, 21:14.
adding computeFrequencies to FFTEngine
be7bc1258547
·frerot on Jun 23 2020, 21:13.

Jun 22 2020

added FFTEngine class
f8e1e9c7a919
·frerot on Jun 22 2020, 20:54.
ignoring deprecation warnings in test_dumper
7d5bdcdc47bb
·frerot on Jun 22 2020, 20:53.

Jun 18 2020

added __contains__ and __iter__ to model bindings
2c3c3ddadf5a
·frerot on Jun 18 2020, 16:23.

Jun 12 2020

updated pipe_tools
ec31430164d5
·frerot on Jun 12 2020, 16:29.
added const for some variables
8af0575bda15
·frerot on Jun 12 2020, 01:07.
fixing recursion issue with ToleranceManager
ff710f40e7e3
·frerot on Jun 12 2020, 01:06.

Jun 11 2020

added compression to UVW dumper
e8c4a114f2ec
·frerot on Jun 11 2020, 20:06.

Jun 9 2020

compressing diff to reduce binary size
6258c7cd43d7
·frerot on Jun 9 2020, 21:11.
added a group dumper for paraview data
ace594b68267
·frerot on Jun 9 2020, 21:04.

Jun 8 2020

writing solver infos to stderr
58fde8ae6754
·frerot on Jun 8 2020, 23:42.
simplified helpers in dumpers
022385d24743
·frerot on Jun 8 2020, 23:42.

Jun 2 2020

simplify git diff stored in binary
64ad818b2ad5
·frerot on Jun 2 2020, 20:39.

May 29 2020

added doc dependencies to Dockerfile
642e354870ce
·frerot on May 29 2020, 17:48.
added intended audience statement in paper and doc index
6fbf01812e11
·frerot on May 29 2020, 17:08.

May 26 2020

testing dumped array values instead of shape
c265f81a2c96
·frerot on May 26 2020, 22:19.
compatibility with python3 scons
bd3962ca451f
·frerot on May 26 2020, 21:57.

May 19 2020

proper definition of python package extras
6292bc12d9e3
·frerot on May 19 2020, 17:37.
better normalization in patch plasticity test
a5c45c2f1235
·frerot on May 19 2020, 17:37.

May 8 2020

[doc] update copyright in sphinx doc
c0bceb17cc1d
·frerot on May 8 2020, 18:12.

May 6 2020

added a test of the EPIC solver [see 09e51e6]
2c694d3bf38f
·frerot on May 6 2020, 00:08.

May 5 2020

added scons target to generate source archive
a1344da0cd86
·frerot on May 5 2020, 22:35.
removing unused files
143a681c1611
·frerot on May 5 2020, 18:40.
update expolit version
83546ffe8bd1
·frerot on May 5 2020, 18:25.
updating copyright years
ae0010d56921
·frerot on May 5 2020, 18:13.
always compiling tamaas_info, even when strip_info==True
4884455e012f
·frerot on May 5 2020, 17:30.

Apr 29 2020

better generation of information file
c1bb3fddf59a
·frerot on Apr 29 2020, 16:34.

Apr 28 2020

fixed memory error in transformOutput
c0aa1c51f0e8
·frerot on Apr 28 2020, 21:27.
fixing convergence issue with non-linear solvers
09e51e6a41e7
·frerot on Apr 28 2020, 18:40.

Apr 27 2020

removed print statement
8368c5ece053
·frerot on Apr 27 2020, 20:27.
cleaned up code for pybind11 detection and module building
0f8bb69278d8
·frerot on Apr 27 2020, 18:00.

Apr 23 2020

added a check for numpy in pybind11 tool
3320663b66ec
·frerot on Apr 23 2020, 20:45.
allowed storing of provided CXXFLAGS into scons setup file
824e0b9504de
·frerot on Apr 23 2020, 17:18.
making sure setup.py can always install to given prefix
829565ab7da8
·tag: v2.1.1
·frerot on Apr 23 2020, 00:38.
bump version 2.1.1
0473580f3d50
·frerot on Apr 23 2020, 00:00.

Apr 22 2020

cleaner definition of fallback scons commands
a1aa792f5ac8
·frerot on Apr 22 2020, 23:58.
making sure tests are passing in python 2.7
c5d6b3690cd1
·frerot on Apr 22 2020, 23:36.
fixed content in sphinx index
3ee9522fe441
·frerot on Apr 22 2020, 20:44.
added reference to paper with Brink
dd5a50d5ae4d
·frerot on Apr 22 2020, 20:21.
added (with premission) all tamaas contributors to JOSS paper
39e0d33f032a
·frerot on Apr 22 2020, 20:12.
added a doc paragraph on using the docker image
ccda062acd0b
·frerot on Apr 22 2020, 20:00.

Apr 21 2020

handeling properly targets install + dev when build_python=False
5eb879c9eb7b
·frerot on Apr 21 2020, 01:33.
added help text for new scons targets
45c296a39774
·frerot on Apr 21 2020, 01:21.
update documentation to reflect changes to install and test targets
75aa4cd59303
·frerot on Apr 21 2020, 01:11.
added target alias "test" for scons
af1a46404bce
·frerot on Apr 21 2020, 00:57.

Apr 20 2020

automatically setting prefix/lib in rpaths
f6f9d433c7ec
·frerot on Apr 20 2020, 21:29.
added -Wextra and fixed some warnings
43f7d9ba9056
·frerot on Apr 20 2020, 21:24.

Apr 17 2020

added all dependencies in docker to run examples
debdd45d12ad
·frerot on Apr 17 2020, 22:46.
corrected code boundary definitions of legacy bem
28b1e8b7df63
·frerot on Apr 17 2020, 22:23.
falling back on setup.py if pip is not installed
619edea1d664
·frerot on Apr 17 2020, 22:04.
defining target aliases for main lib and python module
b1decc875a84
·frerot on Apr 17 2020, 20:59.
actually version number is 2.1.0
23774fdb7372
·tag: v2.1.0
·frerot on Apr 17 2020, 16:35.
bump version number to 1.1.0
abdfb4f1fa05
·frerot on Apr 17 2020, 02:28.
putting test_hertz_kato back on jenkins
759469e4fee7
·frerot on Apr 17 2020, 02:27.
refactored elastic test for kato
0d95bde86776
·frerot on Apr 17 2020, 01:07.

Apr 16 2020

cleaning build in jenkins
42c8d52249ed
·frerot on Apr 16 2020, 23:52.
readme formatting
719d59d14466
·frerot on Apr 16 2020, 23:48.
added install dependencies to scons
9d061de7f380
·frerot on Apr 16 2020, 23:41.
allowing change of integration method in python + appropriate testing
32977d6d20b0
·frerot on Apr 16 2020, 17:31.
fixed cutoff integration [passes tests]
66893ed4c2da
·frerot on Apr 16 2020, 00:37.

Apr 15 2020

fixed segfault
668b7ec50e70
·frerot on Apr 15 2020, 05:13.

Apr 13 2020

finished implementing mindlin with cutoff [segfault on test]
4554024e4d17
·frerot on Apr 13 2020, 23:03.
implemented cutoff integration method [to be tested]
2a65f7fa885d
·frerot on Apr 13 2020, 02:52.

Apr 11 2020

added range over elements to accumulator class
1839e25c4cc7
·frerot on Apr 11 2020, 05:20.
better framework for coexisting integration methods
391e40f8eb10
·frerot on Apr 11 2020, 04:52.

Apr 10 2020

added framework for coexisting integration methods in kelvin
46cdc6715ce0
·frerot on Apr 10 2020, 16:53.

Apr 5 2020

ignoring test_hertz_kato in jenkins builds
73e8bb9a465c
·frerot on Apr 5 2020, 17:02.
added legacy option to jenkins
fa96343acd14
·frerot on Apr 5 2020, 16:42.

Apr 1 2020

added compile option to remove legacy code
131906bb58cc
·frerot on Apr 1 2020, 20:28.
updated kato test
9c3c27ed159f
·frerot on Apr 1 2020, 20:28.
avoid nans in equilibrium loop in kato saturated
87d3010da906
·frerot on Apr 1 2020, 20:26.

Historymaster531937f6e06fb9249474523…

Jun 25 2020

Jun 24 2020

Jun 23 2020

Jun 22 2020

Jun 18 2020

Jun 12 2020

Jun 11 2020

Jun 9 2020

Jun 8 2020

Jun 2 2020

May 29 2020

May 26 2020

May 19 2020

May 8 2020

May 6 2020

May 5 2020

Apr 29 2020

Apr 28 2020

Apr 27 2020

Apr 23 2020

Apr 22 2020

Apr 21 2020

Apr 20 2020

Apr 17 2020

Apr 16 2020

Apr 15 2020

Apr 13 2020

Apr 11 2020

Apr 10 2020

Apr 5 2020

Apr 1 2020

History
master531937f6e06fb9249474523…