Homec4science
Diffusion ShoulderDB_ImportSegmentMeasureAnalyze (glenoidDensity) Graph

Graph
glenoidDensity

History Graph

CommitAuthorDetailsCommitted
4b5355e68791aterrier
readme added in CT directory and comments added in CT/infoCT.m 
Jan 26 2018
a24d4e758f9ckcosende
feat: Add caseID in muscle struct 
Dec 27 2017
33b970a1adeckcosende
fix: Change the path to the CT database 
Dec 27 2017
e904cadc2345kcosende
fix: Correct the path to the database location 
Dec 27 2017
e47f0486b7e4kcosende
No change 
Dec 27 2017
05553cd3e2fckcosende
Add automatically all folder and subfolder when this script is run. 
Dec 27 2017
5f2606627edfkcosende
If the scapula is segmented, take the AL (Acromion Lateral) on the scapula and… 
Dec 27 2017
c59b4f191b3dkcosende
fix: Add a condition about institution name 
Oct 6 2017
d2688ea8a5e5kcosende
Test 
Oct 2 2017
e2a7530d8988kcosende
fix: Change the dimension of matrix DistanceToCyl0 
Sep 29 2017
afeb5b82c938vmalfroy
refactor: Remove unused code and fix warnings in scapula_calculation.m 
Sep 27 2017
e6c18fd1e866kcosende
fix: Change the format date for birthday patient and CT date 
Sep 26 2017
1ba0b9dff245kcosende
fix: Update the location for xlswrite (XLSShoulderDatabaseLocation) 
Sep 26 2017
91b521f14899vmalfroy
feat: Add new case to MySQL database when running infoCT.m 
Sep 25 2017
e412f5003517vmalfroy
feat: infoCT.m writes directly to CT.xls in xlsFromMatlab instead of current… 
Sep 25 2017
5bde85dd1e78vmalfroy
fix: Update path to Generated_Amira_TCL_Scripts for References in… 
Sep 25 2017
6931ec9eca89vmalfroy
Remove DB_Drivers files 
Sep 19 2017
bd6241a930a6kcosende
fix: Export humerus sphere tcl script to the correct folder 
Sep 19 2017
f619ec087b5evmalfroy
refactor: Remove Amira generated scripts and database drivers from version… 
Sep 15 2017
3761869a7f6dvmalfroy
refactor: Refactor Shoulder CT Measurements code - Hierarchy and Folders… 
Sep 15 2017
bbcdba2602f0vmalfroy
fix: Fix format of birth date in table 'anonymity'. 
Sep 15 2017
fdbeb459bbc4vmalfroy
fix: Fiy typo in glenoid.version_ampl column name 
Sep 15 2017
a30b07b1a173vmalfroy
fix: Adapt to changes in column names made in both the XLS and mySQL databases 
Sep 15 2017
89d10748f354kcosende
fix: Solved bugs when print {Line-Set3} 
Sep 15 2017
2279cfd782f9vmalfroy
fix: Change location of XLS shoulder database to lbovenus 
Sep 15 2017
8c4c3a6fc16bvmalfroy
Merge branch 'muscles_branch' 
Sep 15 2017
81d816e93d47vmalfroy
Add shoulder muscles measurements files 
Sep 15 2017
b880bc349c8dvmalfroy
fix: Fix names of LineSet modules and Cylinder surface in the generation of the… 
Sep 15 2017
0f6c3a5bee84vmalfroy
feat: Add handling of scapula.AI to Excel2MySQL databases scripts 
Sep 15 2017
233813c10a01vmalfroy
fix: Compute normal before pathological cases 
Sep 1 2017
e29f7f99f0ccvmalfroy
fix: Fix computation of Acromion Index (AI) 
Sep 1 2017
d61a245e1f9evmalfroy
feat: Add computation of Acromion Index (AI) 
Aug 22 2017
841f68b0f3a1vmalfroy
refactor: move scapula_calculation files to separate folder 
Aug 8 2017
d19d4d820af0vmalfroy
Merged master anatomical measurements conflicts 
Aug 8 2017
bcebeb549ec0vmalfroy
fix: Solved bugs when handling multiple Case IDs 
Aug 8 2017
853593394513vmalfroy
fix: Add missing functions to get CT properties 
Aug 7 2017
b2849724256avmalfroy
feat: Add code for glenoid bone density measurements 
Aug 7 2017
b82336bbf732vmalfroy
feat: Add code fot Humerus anatomical measurements 
Aug 7 2017
7b20474cf7b1vmalfroy
fix: Add missing function for scapula anatomy measurements 
Aug 7 2017
56d95df3d151vmalfroy
feat: Initial code to get CT properties 
Aug 7 2017
67cf25288424vmalfroy
feat: Initial code scapula anatomical measurements 
Aug 7 2017
ba1e1bc5a28evmalfroy
feat: Add functions handling 3D muscle measurement 
Jul 4 2017
452b27fa246bvmalfroy
docs: Update muscleDegeneration function help 
Jul 4 2017
f744fa0d66eavmalfroy
feat: Output structure array for multiple case IDS 
Jun 29 2017
54f13cba374dvmalfroy
feat: Plot fat & osteochondroma segmented area 
Jun 29 2017
260f40b8f635vmalfroy
feat: Add area of muscle measurements to output 
Jun 29 2017
f49a0881f114vmalfroy
docs: Edit help to reflect recent changes 
Jun 27 2017
8747b83331bevmalfroy
fix: Fix osteochondroma threshold 
Jun 26 2017
a74f025ac3bdvmalfroy
feat: Adjust atrophied muscle threshold 
Jun 26 2017
e39408be75ddvmalfroy
feat: Keep only biggest component of muscle 
Jun 26 2017
c031afeafd61vmalfroy
feat: Add new thresholds for muscle and fat 
Jun 26 2017
06bc77344906vmalfroy
feat: Add script to rebuild all 'muscle' database 
Jun 21 2017
80f90d958b95vmalfroy
feat: New thresholds, fat segmentation, and plots 
Jun 21 2017
5cc4f827a990vmalfroy
feat: Change output figure folder, name and title 
Jun 19 2017
b7789f298b16vmalfroy
fix: Fix error when loading multiple Case IDs 
Jun 19 2017
c77214b86648vmalfroy
fix: Remove reading of XLS shoulder database 
Jun 19 2017
30aa777b9d8bvmalfroy
feat: Remove saving results to database 
Jun 19 2017
fb9e5f2dfcccvmalfroy
fix: Fix variable normalization of images 
Jun 15 2017
da3e00881c47vmalfroy
fix: Fix error when using multiple CaseIDs 
Jun 14 2017
8886c71eeb9fvmalfroy
style: Move declaration of databases location 
Jun 13 2017
7154ebb85babvmalfroy
refactor: Remove files to focus rep on anatomy 
Jun 13 2017
b9dff007fe38vmalfroy
docs: Fix mispelling in degenerationAll help 
Jun 13 2017
94fbd1403e76vmalfroy
feat: Fill muscle table in MySQL shoulder database 
Jun 13 2017
21365dc0c4c6vmalfroy
style: Move HU thresholds to beginning of file 
Jun 13 2017
051c311a2227vmalfroy
refactor: Write directly to XLS ShoulderDatabase 
Jun 13 2017
10cef55cef01vmalfroy
chore: Remove unnecessary MATLAB command clean 
Jun 12 2017
a77bc2c7e3c8vmalfroy
docs: Add help on degenerationAll function 
Jun 12 2017
405ab4f330ebvmalfroy
style: Format and clean code 
Jun 12 2017
5a4fc51445cfvmalfroy
refactor: Change format of input for subject 
Jun 12 2017
b43f8b2fb054vmalfroy
docs: Change a wrong comment 
Jun 12 2017
b35a0aafb385vmalfroy
refactor: Remove unused variable and for loop 
Jun 12 2017
8d2978dd4d8cvmalfroy
refactor: Change output directory 
Jun 9 2017
7e5facd3688dvmalfroy
refactor(muscleDegeneration): Clean code 
Jun 7 2017
4e0ab13607fcvmalfroy
chore: Remove output option 'OriginalImage' 
Jun 7 2017
9e72cb5d2f35vmalfroy
docs: Change format of function usage 
Jun 7 2017
ddaf33afd890vmalfroy
style: Remove unnecessary semicolons and variables 
Jun 7 2017
7b555b1b5a0avmalfroy
docs: Add documentation on function usage 
Jun 7 2017
b97774da9884vmalfroy
feat: Remove unnecessary steps in segmentation 
Jun 7 2017
5233bc7a4d91vmalfroy
feat: Original code to measure muscle degeneration 
Jun 7 2017
2a92558b8ca5vmalfroy
feat: scritps to compute muscle degeneration 
Jun 1 2017
1e2a22c2e65dvmalfroy
feat: Original infoCT.m file 
May 11 2017
311dc6245431vmalfroy
style: Change organization of files and support functions 
May 11 2017
014d4d828e39vmalfroy
fix: Compute glenoid sphericity, write huemrus data to My SQL database… 
May 11 2017
2e99efc49c67vmalfroy
feat: Fix typo in error message 'Amira files missing', remove non-unique… 
May 10 2017
e81949d5817bvmalfroy
feat: Check input arguments unicity and issue a warning if duplicate CaseIDs… 
May 10 2017
07cee01132a3vmalfroy
feat: Write to anatomy.xls file in Dropbox and automatically update database 
May 9 2017
9c73f29f3466vmalfroy
feat: Write directly to anatomy.xls file instead of ScapulaMeasuremetns.xls not… 
Apr 27 2017
6a3157645a8cvmalfroy
feat: scapula measure now takes a list of case IDs as input. A demo script… 
Apr 26 2017
687843415f00vmalfroy
style: Add doc on input parameter format 
Apr 20 2017
7845e8ffa198vmalfroy
feat: Complete rewrite of the scapula_measure.m code 
Apr 20 2017
dc1331874f01vmalfroy
Original code 
Apr 20 2017
c4science · Help